Solr Queries

Publication Genotype By Source

Production Query

Dev Query

source count
Total 127767 (-201256)
https://data.monarchinitiative.org/ttl/mgi.ttl 79428 (+79428)
https://data.monarchinitiative.org/ttl/zfin.ttl 28797 (-108)
https://data.monarchinitiative.org/ttl/coriell.ttl 10376 (+76)
https://data.monarchinitiative.org/ttl/go.ttl 9166 (+156)
https://data.monarchinitiative.org/ttl/flybase.ttl 0 (-280808)
Other 0 (0)

Genotype Phenotype Associations By Source

Production Query

Dev Query

source count
Total 573397 (-387715)
https://data.monarchinitiative.org/ttl/mgi.ttl 338204 (+4536)
https://data.monarchinitiative.org/ttl/zfin.ttl 108221 (+18291)
https://data.monarchinitiative.org/ttl/coriell.ttl 75404 (+1000)
https://data.monarchinitiative.org/ttl/hpoa.ttl 75401 (+1000)
https://data.monarchinitiative.org/ttl/impc.ttl 28433 (0)
https://data.monarchinitiative.org/ttl/go.ttl 12162 (+156)
https://data.monarchinitiative.org/ttl/mpd.ttl 10963 (+578)
https://data.monarchinitiative.org/ttl/mgi_slim.ttl 10 (0)
Other 0 (0)
https://data.monarchinitiative.org/ttl/flybase.ttl 0 (-412276)

Pathway Phenotype By Source

Production Query

Dev Query

source count
Total 96965 (+1263)
https://data.monarchinitiative.org/ttl/coriell.ttl 89013 (+2803)
https://data.monarchinitiative.org/ttl/hpoa.ttl 89013 (+2803)
https://data.monarchinitiative.org/ttl/omim.ttl 88944 (+2734)
https://data.monarchinitiative.org/ttl/ctd.ttl 86893 (+2725)
https://data.monarchinitiative.org/ttl/reactome.ttl 33356 (-529)
https://data.monarchinitiative.org/ttl/animalqtldb.ttl 7952 (-1540)
https://data.monarchinitiative.org/ttl/gwascatalog.ttl 7493 (+7493)
https://data.monarchinitiative.org/ttl/orphanet.ttl 884 (+468)
Other 0 (0)

Publication Disease By Source

Production Query

Dev Query

source count
Total 293279 (+56731)
https://data.monarchinitiative.org/ttl/ctd.ttl 98953 (+451)
https://data.monarchinitiative.org/ttl/zfin.ttl 81386 (+12080)
https://data.monarchinitiative.org/ttl/clinvar.nt 48818 (+48818)
https://data.monarchinitiative.org/ttl/wormbase.ttl 24874 (+24496)
https://data.monarchinitiative.org/ttl/go.ttl 20073 (+18841)
https://data.monarchinitiative.org/ttl/ncbigene.ttl 15439 (+15317)
https://data.monarchinitiative.org/ttl/mgi.ttl 14088 (+11964)
https://data.monarchinitiative.org/ttl/omia.ttl 13765 (0)
https://data.monarchinitiative.org/ttl/flybase.ttl 3857 (+1571)
https://data.monarchinitiative.org/ttl/coriell.ttl 3827 (+10)
https://data.monarchinitiative.org/ttl/gwascatalog.ttl 2307 (+175)
https://data.monarchinitiative.org/ttl/hpoa.ttl 1455 (+265)
https://data.monarchinitiative.org/ttl/mgi_slim.ttl 750 (+23)
https://data.monarchinitiative.org/ttl/hgnc.ttl 431 (+430)
https://data.monarchinitiative.org/ttl/monarch.ttl 184 (0)
https://data.monarchinitiative.org/ttl/mmrrc.ttl 102 (+2)
Other 0 (0)
https://data.monarchinitiative.org/ttl/clinvar.ttl 0 (-44539)

Gene Interactions By Source

Production Query

Dev Query

source count
Other 0 (0)
Total 0 (0)

Gene Disease Causal Associations By Source

Production Query

Dev Query

species count
Total 10379 (+247)
Homo sapiens 9629 (+232)
Canis lupus familiaris 230 (0)
Bos taurus 120 (0)
Felis catus 62 (0)
Ovis aries 47 (0)
Gallus gallus 41 (0)
Equus caballus 39 (0)
Sus scrofa 38 (0)
Capra hircus 15 (0)
Oryctolagus cuniculus 12 (0)
Mus musculus 12 (+1)
Coturnix japonica 9 (0)
Hepacivirus C 5 (+5)
Neovison vison 5 (0)
Equus asinus 5 (0)
Mesocricetus auratus 4 (0)
Bubalus bubalis 4 (0)
Oryzias latipes 3 (0)
Macaca mulatta 3 (0)
NCBITaxon:198806 3 (0)
Vulpes lagopus 3 (0)
Bos grunniens 3 (0)
Vulpes vulpes 2 (0)
NCBITaxon:48883 2 (0)
Human alphaherpesvirus 1 2 (+2)
Macaca fascicularis 2 (0)
Meleagris gallopavo 2 (0)
Mammuthus primigenius 2 (0)
Sindbis virus 2 (+2)
Pseudomonas aeruginosa 2 (+2)
NCBITaxon:32536 2 (0)
Mustela putorius furo 2 (0)
Phoenicopterus ruber 1 (0)
NCBITaxon:328808 1 (0)
NCBITaxon:37029 1 (0)
Takifugu rubripes 1 (0)
Delphinapterus leucas 1 (0)
NCBITaxon:8523 1 (0)
NCBITaxon:9690 1 (0)
NCBITaxon:120794 1 (0)
Elephas maximus 1 (0)
Aepyceros melampus 1 (0)
NCBITaxon:34892 1 (0)
Jaagsiekte sheep retrovirus 1 (+1)
Cavia porcellus 1 (0)
NCBITaxon:38666 1 (0)
NCBITaxon:9691 1 (0)
NCBITaxon:54059 1 (0)
NCBITaxon:9579 1 (0)
NCBITaxon:61406 1 (0)
NCBITaxon:273489 1 (0)
Numida meleagris 1 (0)
Sciurus carolinensis 1 (0)
Peromyscus polionotus 1 (0)
NCBITaxon:255217 1 (0)
Dromaius novaehollandiae 1 (0)
NCBITaxon:46844 1 (0)
NCBITaxon:103584 1 (0)
NCBITaxon:61386 1 (0)
Oreochromis niloticus 1 (0)
Ursus americanus 1 (0)
NCBITaxon:57662 1 (0)
Columba livia 1 (0)
Symphalangus syndactylus 1 (0)
Rangifer tarandus 1 (0)
NCBITaxon:9773 1 (0)
Macaca fuscata 1 (0)
Astyanax 1 (0)
Peromyscus maniculatus 1 (0)
NCBITaxon:70340 1 (0)
NCBITaxon:61402 1 (0)
Human immunodeficiency virus 1 1 (+1)
Canis lupus 1 (0)
NCBITaxon:61455 1 (0)
NCBITaxon:57661 1 (0)
Camelus dromedarius 1 (0)
NCBITaxon:68352 1 (0)
Gorilla gorilla 1 (0)
NCBITaxon:118797 1 (0)
Ctenopharyngodon idella 1 (0)
Pan troglodytes 1 (0)
Balaenoptera acutorostrata 1 (0)
NCBITaxon:43597 1 (0)
Hylobates lar 1 (0)
Bos mutus 1 (0)
Tursiops truncatus 1 (0)
NCBITaxon:87177 1 (0)
Candida parapsilosis 1 (+1)
NCBITaxon:338458 1 (0)
Canis latrans 1 (0)
Hepatitis C virus subtype 2a 1 (+1)
Coturnix coturnix 1 (0)
NCBITaxon:345164 1 (0)
Panthera tigris 1 (0)
Cebus apella 1 (0)
Sus scrofa domesticus 1 (0)
Anas platyrhynchos 1 (0)
Panthera tigris tigris 1 (0)
Rattus norvegicus 1 (0)
Other 0 (0)
Mus musculus domesticus 0 (-1)

Gene Variant Associations By Taxa

Production Query

Dev Query

species count
Other 0 (0)
Total 0 (0)

Case Genotype By Source

Production Query

Dev Query

source count
Total 3834 (+11)
https://data.monarchinitiative.org/ttl/coriell.ttl 3801 (+11)
https://data.monarchinitiative.org/ttl/udp.ttl 33 (0)
Other 0 (0)

Gene Homology By Subject Taxa

Production Query

Dev Query

source count
Total 7882010 (+1100809)
Mus musculus 1042164 (+71490)
Danio rerio 921957 (+94110)
Rattus norvegicus 827158 (+50037)
Caenorhabditis elegans 677463 (+65243)
Sus scrofa 614948 (+27670)
Homo sapiens 613825 (+53155)
Drosophila melanogaster 421419 (+61020)
Canis lupus familiaris 360897 (+360897)
Bos taurus 350244 (+26120)
Equus caballus 323826 (+25395)
Xenopus (Silurana) tropicalis 283788 (+24319)
Gallus gallus 277383 (+30711)
Pan troglodytes 211249 (+14605)
Monodelphis domestica 199172 (+13586)
Macaca mulatta 186175 (+13151)
Felis catus 179291 (+179291)
Anolis carolinensis 175169 (+12541)
Arabidopsis thaliana 113934 (-24462)
Saccharomyces cerevisiae S288C 82626 (+12231)
Ornithorhynchus anatinus 17384 (+1071)
organism 335 (+1)
Human alphaherpesvirus 1 324 (+324)
Salmonella enterica subsp. enterica serovar Typhi 131 (+131)
Human immunodeficiency virus 1 102 (+102)
Dengue virus group 99 (+99)
Escherichia coli 91 (+91)
Hepatitis C virus subtype 2a 69 (+69)
NCBITaxon:1334565 67 (+67)
Hepacivirus C 66 (+66)
NCBITaxon:1322345 58 (+58)
Staphylococcus aureus subsp. aureus 57 (+57)
Simian virus 40 52 (+52)
Murine leukemia virus 51 (+51)
Salmonella 43 (+43)
Vaccinia virus 41 (+41)
Jaagsiekte sheep retrovirus 34 (+34)
NCBITaxon:70865 30 (+30)
Human T-cell lymphotrophic virus type 1 (strain ATK) 29 (+29)
Staphylococcus aureus 28 (+28)
Human respiratory syncytial virus B 28 (+28)
Lactobacillus acidophilus 27 (+27)
Cutibacterium acnes 26 (+26)
Bacillus megaterium 24 (+24)
Sindbis virus 22 (+22)
NCBITaxon:387139 21 (+21)
HIV-1 M:C_ETH2220 19 (+19)
Candida parapsilosis 17 (+17)
Pseudomonas aeruginosa 15 (+15)
Yellow fever virus 13 (+13)
Candida albicans 11 (+11)
Human alphaherpesvirus 2 8 (+8)
Mus musculus domesticus 0 (-12976)
Other 0 (0)

Variant Genotype Associations By Source

Production Query

Dev Query

source count
Total 825803 (-859766)
https://data.monarchinitiative.org/ttl/mmrrc.ttl 369418 (+1244)
https://data.monarchinitiative.org/ttl/mgi.ttl 277206 (+6027)
https://data.monarchinitiative.org/ttl/zfin.ttl 160594 (+7232)
https://data.monarchinitiative.org/ttl/impc.ttl 72181 (+237)
https://data.monarchinitiative.org/ttl/coriell.ttl 7270 (+4)
https://data.monarchinitiative.org/ttl/udp.ttl 112 (0)
https://data.monarchinitiative.org/ttl/flybase.ttl 0 (-873495)
Other 0 (0)

Model Disease Associations By Source

Production Query

Dev Query

source count
Total 26369 (-99)
https://data.monarchinitiative.org/ttl/coriell.ttl 12013 (+30)
https://data.monarchinitiative.org/ttl/mgi.ttl 7946 (+142)
https://data.monarchinitiative.org/ttl/wormbase.ttl 3306 (+269)
https://data.monarchinitiative.org/ttl/flybase.ttl 1207 (-594)
https://data.monarchinitiative.org/ttl/zfin.ttl 964 (+54)
https://data.monarchinitiative.org/ttl/omia.ttl 933 (0)
Other 0 (0)

Variant Genotype Associations By Taxa

Production Query

Dev Query

species count
Total 825803 (-859766)
Mus musculus 652284 (+6333)
Danio rerio 160594 (+7232)
organism 7091 (-37)
Homo sapiens 4528 (+3)
sequence_alteration 1235 (+1235)
NCBITaxon:10102 20 (0)
Mus musculus molossinus 15 (0)
Mus musculus bactrianus 7 (0)
Mus spretus 6 (0)
Mus musculus musculus 5 (-6)
Mus 4 (0)
Mus musculus castaneus 4 (0)
Rattus norvegicus 4 (0)
Macaca mulatta 2 (0)
Bos taurus 1 (0)
Plecturocebus moloch 1 (0)
Cricetulus griseus 1 (0)
Saguinus labiatus 1 (0)
Drosophila melanogaster 0 (-873495)
Mus musculus domesticus 0 (-1031)
Other 0 (0)

Gene Interactions By Subject Taxa

Production Query

Dev Query

source count
Other 0 (0)
Total 0 (0)

Gene Phenotype Associations By Source

Production Query

Dev Query

source count
Total 659171 (-63542)
https://data.monarchinitiative.org/ttl/mgi_slim.ttl 209155 (+3385)
https://data.monarchinitiative.org/ttl/hpoa.ttl 102035 (-28919)
https://data.monarchinitiative.org/ttl/clinvar.nt 97139 (+97139)
https://data.monarchinitiative.org/ttl/omim.ttl 86174 (+7580)
https://data.monarchinitiative.org/ttl/flybase.ttl 77806 (-118269)
https://data.monarchinitiative.org/ttl/wormbase.ttl 77096 (+23379)
https://data.monarchinitiative.org/ttl/sgd.ttl 68224 (0)
https://data.monarchinitiative.org/ttl/zfinslim.ttl 62606 (+9172)
https://data.monarchinitiative.org/ttl/gwascatalog.ttl 48152 (+48147)
https://data.monarchinitiative.org/ttl/impc.ttl 17417 (0)
https://data.monarchinitiative.org/ttl/mgi.ttl 16087 (0)
https://data.monarchinitiative.org/ttl/go.ttl 11601 (+1826)
https://data.monarchinitiative.org/ttl/zfin.ttl 9067 (+124)
https://data.monarchinitiative.org/ttl/coriell.ttl 7125 (+260)
https://data.monarchinitiative.org/ttl/mmrrc.ttl 5239 (+125)
https://data.monarchinitiative.org/ttl/omia.ttl 1009 (0)
https://data.monarchinitiative.org/ttl/monarch.ttl 988 (0)
https://data.monarchinitiative.org/ttl/rgd.ttl 463 (+7)
https://data.monarchinitiative.org/ttl/orphanet.ttl 0 (-97786)
https://data.monarchinitiative.org/ttl/clinvar.ttl 0 (-89034)
Other 0 (0)

Variant Phenotype Associations By Taxa

Production Query

Dev Query

species count
Total 3664724 (+153483)
Homo sapiens 2137928 (+252012)
organism 466878 (-164615)
Mus musculus 428643 (+73371)
Caenorhabditis elegans 195108 (+104047)
Drosophila melanogaster 146328 (-64463)
Bos taurus 125205 (+7)
Danio rerio 107514 (+15459)
Sus scrofa 34559 (0)
Gallus gallus 13529 (+190)
Ovis aries 1519 (+26)
sequence_alteration 1305 (+1305)
Equus caballus 1009 (+2)
Drosophila hydei 663 (+663)
Drosophila subobscura 602 (+602)
Drosophila virilis 600 (+600)
Drosophila ananassae 422 (+422)
Drosophila pseudoobscura pseudoobscura 324 (+324)
Drosophila simulans 283 (+283)
Drosophila willistoni 260 (+260)
Drosophila funebris 229 (+229)
NCBITaxon:40372 206 (+206)
NCBITaxon:7257 156 (+156)
NCBITaxon:30019 142 (+142)
Drosophila immigrans 108 (+108)
NCBITaxon:95109 100 (+100)
NCBITaxon:30033 95 (+95)
NCBITaxon:7246 76 (+76)
Drosophila mauritiana 76 (+76)
NCBITaxon:7300 71 (+71)
NCBITaxon:30042 68 (+68)
Drosophila buzzatii 67 (+67)
Drosophila miranda 65 (+65)
Drosophila paulistorum 60 (+60)
NCBITaxon:76712 52 (+52)
Drosophila littoralis 45 (+45)
Drosophila persimilis 39 (+39)
NCBITaxon:7218 35 (+35)
Drosophila mojavensis 34 (+34)
Drosophila ambigua 28 (+28)
Saccharomyces cerevisiae S288C 23 (0)
NCBITaxon:193351 22 (+22)
NCBITaxon:125945 18 (+18)
Drosophila auraria 18 (+18)
NCBITaxon:7282 14 (+14)
NCBITaxon:7283 13 (+13)
NCBITaxon:42026 11 (+11)
NCBITaxon:64960 11 (+11)
NCBITaxon:46794 10 (+10)
NCBITaxon:30036 9 (+9)
Drosophila sechellia 9 (+9)
NCBITaxon:161732 9 (+9)
Drosophila takahashii 8 (+8)
NCBITaxon:47314 7 (+7)
NCBITaxon:30043 7 (+7)
NCBITaxon:169138 7 (+7)
NCBITaxon:94111 6 (+6)
NCBITaxon:7291 5 (+5)
NCBITaxon:30023 4 (+4)
NCBITaxon:69217 4 (+4)
NCBITaxon:30028 4 (+4)
Drosophila eugracilis 4 (+4)
NCBITaxon:46822 4 (+4)
NCBITaxon:40844 4 (+4)
NCBITaxon:7252 3 (+3)
NCBITaxon:218680 3 (+3)
Drosophila pseudoobscura bogotana 3 (+3)
NCBITaxon:103846 3 (+3)
Drosophila equinoxialis 3 (+3)
NCBITaxon:198721 3 (+3)
NCBITaxon:7297 2 (+2)
Scaptodrosophila lebanonensis 2 (+2)
Drosophila yakuba 2 (+2)
NCBITaxon:30056 2 (+2)
NCBITaxon:195057 2 (+2)
NCBITaxon:76946 2 (+2)
Drosophila madeirensis 2 (+2)
NCBITaxon:134002 2 (+2)
Drosophila erecta 2 (+2)
NCBITaxon:133978 2 (+2)
NCBITaxon:42062 2 (+2)
NCBITaxon:7279 2 (+2)
NCBITaxon:7271 2 (+2)
NCBITaxon:57910 2 (+2)
Drosophila arizonae 2 (+2)
NCBITaxon:30029 2 (+2)
NCBITaxon:133981 2 (+2)
NCBITaxon:7270 2 (+2)
NCBITaxon:141217 2 (+2)
Drosophila lutescens 1 (+1)
Other 1 (-182)
NCBITaxon:7284 1 (+1)
NCBITaxon:310057 1 (+1)
NCBITaxon:66368 1 (+1)
NCBITaxon:7231 1 (+1)
Mus musculus domesticus 0 (-68851)

Gene Pathway By Source

Production Query

Dev Query

source count
Total 306921 (-9752)
https://data.monarchinitiative.org/ttl/reactome.ttl 204133 (-9888)
https://data.monarchinitiative.org/ttl/ctd.ttl 135636 (-31)
https://data.monarchinitiative.org/ttl/ensembl.ttl 37 (-658)
Other 0 (0)

Case Gene By Source

Production Query

Dev Query

source count
Total 1291 (+25)
https://data.monarchinitiative.org/ttl/coriell.ttl 1289 (+27)
https://data.monarchinitiative.org/ttl/omim.ttl 1266 (+2)
https://data.monarchinitiative.org/ttl/gwascatalog.ttl 127 (+127)
https://data.monarchinitiative.org/ttl/udp.ttl 2 (-2)
Other 0 (0)

Gene Variant Associations By Source

Production Query

Dev Query

source count
Other 0 (0)
Total 0 (0)

Variant Disease Associations By Taxa

Production Query

Dev Query

species count
Total 112866 (+8233)
Homo sapiens 112093 (+8271)
organism 735 (-38)
Mus musculus 37 (+16)
Bos taurus 1 (0)
Other 0 (0)
Mus musculus domesticus 0 (-16)

Publication Variant By Source

Production Query

Dev Query

source count
Total 5400335 (-2751152)
https://data.monarchinitiative.org/ttl/ncbigene.ttl 4294007 (+125139)
https://data.monarchinitiative.org/ttl/animalqtldb.ttl 250257 (+785)
https://data.monarchinitiative.org/ttl/mgi.ttl 155812 (+155808)
https://data.monarchinitiative.org/ttl/clinvar.nt 154611 (+154611)
https://data.monarchinitiative.org/ttl/flybase.ttl 151798 (-3531815)
https://data.monarchinitiative.org/ttl/gwascatalog.ttl 111869 (+29907)
https://data.monarchinitiative.org/ttl/wormbase.ttl 107268 (+43753)
https://data.monarchinitiative.org/ttl/zfin.ttl 69040 (+1090)
https://data.monarchinitiative.org/ttl/omim.ttl 43372 (+548)
https://data.monarchinitiative.org/ttl/coriell.ttl 38325 (+212)
https://data.monarchinitiative.org/ttl/hgnc.ttl 32096 (+251)
https://data.monarchinitiative.org/ttl/go.ttl 29178 (+861)
https://data.monarchinitiative.org/ttl/mgi_slim.ttl 7603 (+53)
https://data.monarchinitiative.org/ttl/kegg.ttl 6170 (+123)
https://data.monarchinitiative.org/ttl/omia.ttl 5191 (0)
https://data.monarchinitiative.org/ttl/impc.ttl 4580 (+4580)
https://data.monarchinitiative.org/ttl/mmrrc.ttl 1606 (-19)
https://data.monarchinitiative.org/ttl/ctd.ttl 1400 (+1360)
https://data.monarchinitiative.org/ttl/hpoa.ttl 120 (+120)
https://data.monarchinitiative.org/ttl/sgd.ttl 29 (0)
Other 0 (0)
https://data.monarchinitiative.org/ttl/biogrid.ttl 0 (-520)
https://data.monarchinitiative.org/ttl/clinvar.ttl 0 (-149825)

Publication Model By Source

Production Query

Dev Query

source count
Total 48621 (+30143)
https://data.monarchinitiative.org/ttl/wormbase.ttl 15500 (+15249)
https://data.monarchinitiative.org/ttl/mgi.ttl 14884 (+12878)
https://data.monarchinitiative.org/ttl/go.ttl 12708 (+11635)
https://data.monarchinitiative.org/ttl/coriell.ttl 8622 (+34)
https://data.monarchinitiative.org/ttl/ncbigene.ttl 8007 (+7881)
https://data.monarchinitiative.org/ttl/flybase.ttl 4098 (+1667)
https://data.monarchinitiative.org/ttl/zfin.ttl 2882 (+315)
https://data.monarchinitiative.org/ttl/omia.ttl 2635 (0)
https://data.monarchinitiative.org/ttl/mgi_slim.ttl 780 (+23)
https://data.monarchinitiative.org/ttl/mmrrc.ttl 102 (+4)
https://data.monarchinitiative.org/ttl/ctd.ttl 3 (+3)
Other 0 (0)

Genotype Phenotype Associations By Taxa

Production Query

Dev Query

species count
Total 573397 (-387715)
Mus musculus 358530 (+5684)
Danio rerio 120376 (+18447)
Homo sapiens 75404 (+1000)
organism 17512 (+461)
sequence_alteration 1520 (+1520)
Mus musculus molossinus 13 (0)
NCBITaxon:477815 12 (0)
Mus musculus castaneus 12 (0)
NCBITaxon:10102 8 (0)
Mus 4 (0)
Mus musculus musculus 3 (-11)
Mus spretus 2 (0)
Mus musculus bactrianus 1 (0)
Other 0 (0)
Mus musculus domesticus 0 (-2540)
Drosophila melanogaster 0 (-412276)

Gene Disease Non-Causal Associations By Source

Production Query

Dev Query

species count
Total 33739 (+16244)
Homo sapiens 33285 (+16107)
Mus musculus 215 (+10)
Rattus norvegicus 34 (+2)
Drosophila melanogaster 33 (-1)
Hepacivirus C 26 (+26)
Pseudomonas aeruginosa 24 (+24)
Danio rerio 24 (0)
Human alphaherpesvirus 2 14 (+14)
Human alphaherpesvirus 1 7 (+7)
Human immunodeficiency virus 1 6 (+6)
Sus scrofa 5 (0)
Simian virus 40 5 (+5)
Hepatitis C virus subtype 2a 5 (+5)
NCBITaxon:1322345 5 (+5)
HIV-1 M:C_ETH2220 5 (+5)
Vaccinia virus 5 (+5)
Human T-cell lymphotrophic virus type 1 (strain ATK) 4 (+4)
Caenorhabditis elegans 4 (0)
Bos taurus 4 (0)
Candida albicans 4 (+4)
Bacillus megaterium 3 (+3)
Sindbis virus 3 (+3)
NCBITaxon:387139 3 (+3)
Yellow fever virus 3 (+3)
Human respiratory syncytial virus B 2 (+2)
Salmonella 2 (+2)
Gallus gallus 2 (0)
Xenopus (Silurana) tropicalis 2 (+1)
Candida parapsilosis 1 (+1)
NCBITaxon:1334565 1 (+1)
Lactobacillus acidophilus 1 (+1)
Salmonella enterica subsp. enterica serovar Typhi 1 (+1)
NCBITaxon:70865 1 (+1)
Other 0 (0)
Mus musculus domesticus 0 (-5)
Canis lupus familiaris 0 (-1)

Case Disease By Source

Production Query

Dev Query

source count
Total 11329 (+22)
https://data.monarchinitiative.org/ttl/coriell.ttl 11291 (+22)
https://data.monarchinitiative.org/ttl/udp.ttl 38 (0)
Other 0 (0)

Case Variant By Source

Production Query

Dev Query

source count
Total 4405 (+3)
https://data.monarchinitiative.org/ttl/coriell.ttl 4293 (+3)
https://data.monarchinitiative.org/ttl/udp.ttl 112 (0)
Other 0 (0)

Variant Phenotype Associations By Source

Production Query

Dev Query

source count
Total 3664724 (+153483)
https://data.monarchinitiative.org/ttl/hpoa.ttl 2045647 (+157173)
https://data.monarchinitiative.org/ttl/clinvar.nt 1961213 (+1961213)
https://data.monarchinitiative.org/ttl/mgi.ttl 749888 (+11333)
https://data.monarchinitiative.org/ttl/animalqtldb.ttl 213937 (+225)
https://data.monarchinitiative.org/ttl/wormbase.ttl 192990 (+72963)
https://data.monarchinitiative.org/ttl/zfin.ttl 174952 (+34739)
https://data.monarchinitiative.org/ttl/gwascatalog.ttl 166000 (+100727)
https://data.monarchinitiative.org/ttl/flybase.ttl 151559 (-218054)
https://data.monarchinitiative.org/ttl/impc.ttl 58498 (+488)
https://data.monarchinitiative.org/ttl/go.ttl 51105 (+751)
https://data.monarchinitiative.org/ttl/mgi_slim.ttl 33512 (+414)
https://data.monarchinitiative.org/ttl/omim.ttl 8259 (+213)
https://data.monarchinitiative.org/ttl/ctd.ttl 560 (0)
https://data.monarchinitiative.org/ttl/orphanet.ttl 23 (0)
https://data.monarchinitiative.org/ttl/sgd.ttl 23 (0)
https://data.monarchinitiative.org/ttl/coriell.ttl 3 (0)
Other 0 (0)
https://data.monarchinitiative.org/ttl/clinvar.ttl 0 (-1816735)

Model Disease Associations By Taxa

Production Query

Dev Query

species count
Total 26369 (-99)
Homo sapiens 12010 (+30)
Mus musculus 7829 (+631)
Caenorhabditis elegans 3306 (+269)
Drosophila melanogaster 1207 (-594)
Danio rerio 961 (+53)
Carnivora 684 (0)
Ruminantia 144 (0)
organism 96 (-1)
Felidae 55 (0)
Equidae 34 (0)
sequence_alteration 18 (+18)
Suidae 5 (0)
Sus 5 (0)
Bos taurus 3 (0)
Other 3 (+1)
Gallus gallus 3 (0)
Bovidae 2 (0)
NCBITaxon:477815 2 (0)
Viridiplantae 1 (0)
Mus musculus castaneus 1 (0)
Mus musculus musculus 0 (-2)
Mus musculus domesticus 0 (-504)

Gene Disease Non-causal Associations By Taxa

Production Query

Dev Query

species count
Total 33739 (+16244)
Homo sapiens 33285 (+16107)
Mus musculus 215 (+10)
Rattus norvegicus 34 (+2)
Drosophila melanogaster 33 (-1)
Hepacivirus C 26 (+26)
Pseudomonas aeruginosa 24 (+24)
Danio rerio 24 (0)
Human alphaherpesvirus 2 14 (+14)
Human alphaherpesvirus 1 7 (+7)
Human immunodeficiency virus 1 6 (+6)
Sus scrofa 5 (0)
Simian virus 40 5 (+5)
Hepatitis C virus subtype 2a 5 (+5)
NCBITaxon:1322345 5 (+5)
HIV-1 M:C_ETH2220 5 (+5)
Vaccinia virus 5 (+5)
Human T-cell lymphotrophic virus type 1 (strain ATK) 4 (+4)
Caenorhabditis elegans 4 (0)
Bos taurus 4 (0)
Candida albicans 4 (+4)
Bacillus megaterium 3 (+3)
Sindbis virus 3 (+3)
NCBITaxon:387139 3 (+3)
Yellow fever virus 3 (+3)
Human respiratory syncytial virus B 2 (+2)
Salmonella 2 (+2)
Gallus gallus 2 (0)
Xenopus (Silurana) tropicalis 2 (+1)
Candida parapsilosis 1 (+1)
NCBITaxon:1334565 1 (+1)
Lactobacillus acidophilus 1 (+1)
Salmonella enterica subsp. enterica serovar Typhi 1 (+1)
NCBITaxon:70865 1 (+1)
Other 0 (0)
Mus musculus domesticus 0 (-5)
Canis lupus familiaris 0 (-1)

Case Model By Source

Production Query

Dev Query

source count
https://data.monarchinitiative.org/ttl/coriell.ttl 29852 (+45)
Total 29852 (+45)
Other 0 (0)

Gene Disease Causal Associations By Taxa

Production Query

Dev Query

species count
Total 10379 (+247)
Homo sapiens 9629 (+232)
Canis lupus familiaris 230 (0)
Bos taurus 120 (0)
Felis catus 62 (0)
Ovis aries 47 (0)
Gallus gallus 41 (0)
Equus caballus 39 (0)
Sus scrofa 38 (0)
Capra hircus 15 (0)
Oryctolagus cuniculus 12 (0)
Mus musculus 12 (+1)
Coturnix japonica 9 (0)
Hepacivirus C 5 (+5)
Neovison vison 5 (0)
Equus asinus 5 (0)
Mesocricetus auratus 4 (0)
Bubalus bubalis 4 (0)
Oryzias latipes 3 (0)
Macaca mulatta 3 (0)
NCBITaxon:198806 3 (0)
Vulpes lagopus 3 (0)
Bos grunniens 3 (0)
Vulpes vulpes 2 (0)
NCBITaxon:48883 2 (0)
Human alphaherpesvirus 1 2 (+2)
Macaca fascicularis 2 (0)
Meleagris gallopavo 2 (0)
Mammuthus primigenius 2 (0)
Sindbis virus 2 (+2)
Pseudomonas aeruginosa 2 (+2)
NCBITaxon:32536 2 (0)
Mustela putorius furo 2 (0)
Phoenicopterus ruber 1 (0)
NCBITaxon:328808 1 (0)
NCBITaxon:37029 1 (0)
Takifugu rubripes 1 (0)
Delphinapterus leucas 1 (0)
NCBITaxon:8523 1 (0)
NCBITaxon:9690 1 (0)
NCBITaxon:120794 1 (0)
Elephas maximus 1 (0)
Aepyceros melampus 1 (0)
NCBITaxon:34892 1 (0)
Jaagsiekte sheep retrovirus 1 (+1)
Cavia porcellus 1 (0)
NCBITaxon:38666 1 (0)
NCBITaxon:9691 1 (0)
NCBITaxon:54059 1 (0)
NCBITaxon:9579 1 (0)
NCBITaxon:61406 1 (0)
NCBITaxon:273489 1 (0)
Numida meleagris 1 (0)
Sciurus carolinensis 1 (0)
Peromyscus polionotus 1 (0)
NCBITaxon:255217 1 (0)
Dromaius novaehollandiae 1 (0)
NCBITaxon:46844 1 (0)
NCBITaxon:103584 1 (0)
NCBITaxon:61386 1 (0)
Oreochromis niloticus 1 (0)
Ursus americanus 1 (0)
NCBITaxon:57662 1 (0)
Columba livia 1 (0)
Symphalangus syndactylus 1 (0)
Rangifer tarandus 1 (0)
NCBITaxon:9773 1 (0)
Macaca fuscata 1 (0)
Astyanax 1 (0)
Peromyscus maniculatus 1 (0)
NCBITaxon:70340 1 (0)
NCBITaxon:61402 1 (0)
Human immunodeficiency virus 1 1 (+1)
Canis lupus 1 (0)
NCBITaxon:61455 1 (0)
NCBITaxon:57661 1 (0)
Camelus dromedarius 1 (0)
NCBITaxon:68352 1 (0)
Gorilla gorilla 1 (0)
NCBITaxon:118797 1 (0)
Ctenopharyngodon idella 1 (0)
Pan troglodytes 1 (0)
Balaenoptera acutorostrata 1 (0)
NCBITaxon:43597 1 (0)
Hylobates lar 1 (0)
Bos mutus 1 (0)
Tursiops truncatus 1 (0)
NCBITaxon:87177 1 (0)
Candida parapsilosis 1 (+1)
NCBITaxon:338458 1 (0)
Canis latrans 1 (0)
Hepatitis C virus subtype 2a 1 (+1)
Coturnix coturnix 1 (0)
NCBITaxon:345164 1 (0)
Panthera tigris 1 (0)
Cebus apella 1 (0)
Sus scrofa domesticus 1 (0)
Anas platyrhynchos 1 (0)
Panthera tigris tigris 1 (0)
Rattus norvegicus 1 (0)
Other 0 (0)
Mus musculus domesticus 0 (-1)

Disease Phenotype Associations By Source

Production Query

Dev Query

species count
Total 155625 (+9605)
https://data.monarchinitiative.org/ttl/hpoa.ttl 153546 (+9604)
https://data.monarchinitiative.org/ttl/monarch.ttl 1804 (0)
https://data.monarchinitiative.org/ttl/omia.ttl 221 (0)
https://data.monarchinitiative.org/ttl/omim.ttl 2 (+2)
Other 0 (0)

Publication Phenotype By Source

Production Query

Dev Query

source count
Total 5087860 (-1194988)
https://data.monarchinitiative.org/ttl/ncbigene.ttl 4170437 (+125401)
https://data.monarchinitiative.org/ttl/go.ttl 1038405 (+229075)
https://data.monarchinitiative.org/ttl/flybase.ttl 96829 (-1892315)
https://data.monarchinitiative.org/ttl/sgd.ttl 86732 (0)
https://data.monarchinitiative.org/ttl/zfin.ttl 70438 (+103)
https://data.monarchinitiative.org/ttl/gwascatalog.ttl 59818 (+58909)
https://data.monarchinitiative.org/ttl/mgi.ttl 57835 (+46665)
https://data.monarchinitiative.org/ttl/clinvar.nt 52474 (+52474)
https://data.monarchinitiative.org/ttl/wormbase.ttl 36448 (+7921)
https://data.monarchinitiative.org/ttl/mgi_slim.ttl 31951 (+241)
https://data.monarchinitiative.org/ttl/omim.ttl 28373 (+760)
https://data.monarchinitiative.org/ttl/hgnc.ttl 27894 (+272)
https://data.monarchinitiative.org/ttl/ctd.ttl 24111 (+428)
https://data.monarchinitiative.org/ttl/zfinslim.ttl 13173 (+582)
https://data.monarchinitiative.org/ttl/mmrrc.ttl 7503 (+5266)
https://data.monarchinitiative.org/ttl/impc.ttl 4630 (+4491)
https://data.monarchinitiative.org/ttl/animalqtldb.ttl 4613 (0)
https://data.monarchinitiative.org/ttl/rgd.ttl 176 (+3)
https://data.monarchinitiative.org/ttl/hpoa.ttl 4 (0)
https://data.monarchinitiative.org/ttl/biogrid.ttl 0 (-317771)
https://data.monarchinitiative.org/ttl/clinvar.ttl 0 (-51789)
Other 0 (0)

Case Phenotype By Source

Production Query

Dev Query

source count
Total 1085 (0)
https://data.monarchinitiative.org/ttl/udp.ttl 1076 (0)
https://data.monarchinitiative.org/ttl/coriell.ttl 9 (0)
Other 0 (0)

Gene Phenotype Associations By Taxa

Production Query

Dev Query

species count
Total 659171 (-63542)
Mus musculus 212741 (+10903)
Homo sapiens 149362 (+18388)
Caenorhabditis elegans 77217 (+23354)
Drosophila melanogaster 69381 (-126694)
Saccharomyces cerevisiae S288C 68230 (0)
Danio rerio 65805 (+9136)
organism 11075 (+5016)
Canis lupus familiaris 476 (0)
Drosophila hydei 468 (+468)
Rattus norvegicus 468 (+7)
Drosophila subobscura 377 (+377)
Drosophila virilis 342 (+342)
Drosophila ananassae 270 (+270)
Drosophila simulans 208 (+208)
Drosophila pseudoobscura pseudoobscura 206 (+206)
Drosophila willistoni 194 (+194)
Bos taurus 163 (0)
NCBITaxon:7257 153 (+153)
Drosophila funebris 133 (+133)
Felis catus 132 (0)
NCBITaxon:30019 124 (+124)
NCBITaxon:40372 118 (+118)
NCBITaxon:95109 82 (+82)
NCBITaxon:30033 82 (+82)
Pseudomonas aeruginosa 76 (+76)
Drosophila immigrans 72 (+72)
Hepatitis C virus subtype 2a 70 (+70)
NCBITaxon:7300 69 (+69)
NCBITaxon:7246 63 (+63)
Ovis aries 57 (0)
NCBITaxon:30042 56 (+56)
Drosophila buzzatii 55 (+55)
Drosophila mauritiana 52 (+52)
Drosophila paulistorum 49 (+49)
Human immunodeficiency virus 1 48 (+48)
Drosophila miranda 43 (+43)
Drosophila littoralis 34 (+34)
Hepacivirus C 34 (+34)
NCBITaxon:7218 33 (+33)
Equus caballus 31 (0)
Sus scrofa 31 (0)
Drosophila ambigua 27 (+27)
NCBITaxon:193351 22 (+22)
Human alphaherpesvirus 2 19 (+19)
Gallus gallus 19 (0)
Capra hircus 18 (0)
Phoenicopterus ruber 17 (0)
NCBITaxon:125945 15 (+15)
Drosophila persimilis 14 (+14)
NCBITaxon:76712 14 (+14)
NCBITaxon:7283 13 (+13)
NCBITaxon:7282 13 (+13)
Drosophila mojavensis 12 (+12)
Drosophila auraria 11 (+11)
NCBITaxon:64960 11 (+11)
Candida parapsilosis 11 (+11)
NCBITaxon:46794 10 (+10)
Jaagsiekte sheep retrovirus 10 (+10)
Mustela putorius furo 10 (0)
Oryctolagus cuniculus 10 (0)
Drosophila sechellia 9 (+9)
NCBITaxon:42026 7 (+7)
NCBITaxon:30043 7 (+7)
NCBITaxon:169138 7 (+7)
Yellow fever virus 7 (+7)
Vaccinia virus 7 (+7)
Human alphaherpesvirus 1 6 (+6)
Simian virus 40 6 (+6)
Sindbis virus 6 (+6)
NCBITaxon:47314 6 (+6)
NCBITaxon:161732 6 (+6)
NCBITaxon:69217 4 (+4)
Oryzias latipes 4 (0)
Macaca mulatta 4 (0)
HIV-1 M:C_ETH2220 4 (+4)
NCBITaxon:30028 4 (+4)
Neovison vison 4 (0)
NCBITaxon:46822 4 (+4)
NCBITaxon:40844 4 (+4)
Human T-cell lymphotrophic virus type 1 (strain ATK) 3 (+3)
Mesocricetus auratus 3 (0)
NCBITaxon:7252 3 (+3)
NCBITaxon:30036 3 (+3)
Bacillus megaterium 3 (+3)
NCBITaxon:218680 3 (+3)
Drosophila pseudoobscura bogotana 3 (+3)
NCBITaxon:198721 3 (+3)
Drosophila takahashii 3 (+3)
NCBITaxon:94111 3 (+3)
Drosophila equinoxialis 3 (+3)
Meleagris gallopavo 3 (0)
NCBITaxon:7291 2 (+2)
Scaptodrosophila lebanonensis 2 (+2)
Vulpes vulpes 2 (0)
NCBITaxon:195057 2 (+2)
NCBITaxon:76946 2 (+2)
NCBITaxon:30023 2 (+2)
Drosophila madeirensis 2 (+2)
NCBITaxon:134002 2 (+2)
Drosophila erecta 2 (+2)
Candida albicans 2 (+2)
NCBITaxon:133978 2 (+2)
NCBITaxon:7271 2 (+2)
NCBITaxon:42062 2 (+2)
Drosophila arizonae 2 (+2)
Drosophila eugracilis 2 (+2)
NCBITaxon:30029 2 (+2)
NCBITaxon:133981 2 (+2)
NCBITaxon:7270 2 (+2)
Bubalus bubalis 2 (0)
NCBITaxon:141217 2 (+2)
NCBITaxon:7297 1 (+1)
NCBITaxon:30056 1 (+1)
Bos grunniens 1 (0)
NCBITaxon:9690 1 (0)
Drosophila lutescens 1 (+1)
Staphylococcus aureus 1 (+1)
Mammuthus primigenius 1 (0)
NCBITaxon:57910 1 (+1)
Coturnix japonica 1 (0)
NCBITaxon:310057 1 (+1)
Peromyscus polionotus 1 (0)
NCBITaxon:7279 1 (+1)
NCBITaxon:70340 1 (0)
Drosophila yakuba 1 (+1)
NCBITaxon:68352 1 (0)
Sciurus carolinensis 1 (0)
Ursus americanus 1 (0)
Panthera tigris tigris 1 (0)
NCBITaxon:32536 1 (0)
NCBITaxon:43597 1 (0)
NCBITaxon:7284 1 (+1)
NCBITaxon:87177 1 (0)
NCBITaxon:61402 1 (0)
NCBITaxon:66368 1 (+1)
Numida meleagris 1 (0)
NCBITaxon:103846 1 (+1)
Salmonella 1 (+1)
NCBITaxon:38666 1 (0)
NCBITaxon:27706 1 (0)
NCBITaxon:7231 1 (+1)
Salmonella enterica subsp. enterica serovar Typhi 1 (+1)
Vulpes lagopus 1 (0)
Dengue virus group 1 (+1)
Other 0 (0)
Mus musculus domesticus 0 (-7540)

Relations

Production Query

Dev Query

relation count
Total 36277152 (-6163222)
is_about 8560125 (+398497)
has phenotype 4790072 (-353778)
interacts with 2977954 (-645930)
in paralogy relationship with 2931576 (+144646)
Source 2715636 (+121374)
Other 2597779 (-2293735)
in 1 to 1 orthology relationship with 2552902 (+563292)
in orthology relationship with 2108312 (+396884)
expressed in 1862538 (+4067)
involved_in 1550334 (+446579)
is_allele_of 852000 (-169692)
is part of 470222 (+113407)
enables 416639 (+97969)
has_affected_feature 406345 (+248593)
has_genotype 404652 (-343159)
in xenology relationship with 289220 (-4013)
contributes to condition 192788 (+161718)
is marker for 140588 (+549)
is_expression_variant_of 111240 (-60028)
mentions 104693 (-4586000)
pathogenic_for_condition 58823 (+3526)
is_reference_allele_of 58320 (+183)
is model of 37660 (-77)
derives_from 29852 (+45)
likely_pathogenic_for_condition 19398 (+724)
targets_gene 17880 (-157613)
causes condition 10539 (-295)
sequence_derives_from 8509 (-141619)
is causal susceptibility factor for 430 (+430)
contributes to 70 (-281)
disease has basis in feature 54 (+1)
is_variant_allele_of 2 (0)
colocalizes with 0 (-83256)
genetically interacts with 0 (-26230)

Disease Phenotype Associations By Taxa

Production Query

Dev Query

species count
Total 155625 (+9605)
Other 145184 (-820)
Homo sapiens 10441 (+10425)

Gene Pathway By Taxa

Production Query

Dev Query

source count
Total 306921 (-9752)
Homo sapiens 142012 (+184)
Mus musculus 27011 (+980)
Rattus norvegicus 23563 (+19)
Canis lupus familiaris 19579 (-583)
Sus scrofa 19468 (-2047)
Danio rerio 19119 (-7123)
Bos taurus 18811 (-2309)
Gallus gallus 13867 (-2303)
Drosophila melanogaster 11514 (+795)
Caenorhabditis elegans 11380 (+3241)
Hepatitis C virus subtype 2a 108 (+108)
Dengue virus group 101 (+101)
Human immunodeficiency virus 1 42 (+42)
organism 37 (-841)
Human alphaherpesvirus 1 33 (+33)
Pseudomonas aeruginosa 28 (+28)
Simian virus 40 26 (+26)
HIV-1 M:C_ETH2220 26 (+26)
Hepacivirus C 23 (+23)
Jaagsiekte sheep retrovirus 22 (+22)
Vaccinia virus 20 (+20)
Escherichia coli 19 (+19)
Human T-cell lymphotrophic virus type 1 (strain ATK) 17 (+17)
Sindbis virus 13 (+13)
Human alphaherpesvirus 2 11 (+11)
NCBITaxon:70865 7 (+7)
Salmonella 7 (+7)
Yellow fever virus 6 (+6)
Staphylococcus aureus subsp. aureus 6 (+6)
NCBITaxon:536056 5 (+5)
Bacillus megaterium 5 (+5)
Candida parapsilosis 5 (+5)
NCBITaxon:1322345 5 (+5)
Candida albicans 4 (+4)
Lactobacillus acidophilus 4 (+4)
NCBITaxon:1334565 3 (+3)
Staphylococcus aureus 3 (+3)
Cutibacterium acnes 3 (+3)
Salmonella enterica subsp. enterica serovar Typhi 3 (+3)
Human respiratory syncytial virus B 3 (+3)
NCBITaxon:387139 2 (+2)
Mus musculus domesticus 0 (-325)
Other 0 (0)

Gene Function By Taxa

Production Query

Dev Query

source count
Total 1893671 (+431104)
Mus musculus 341924 (+5775)
Homo sapiens 314665 (+1144)
Rattus norvegicus 294398 (+3351)
Danio rerio 171899 (-3414)
Sus scrofa 137514 (+115999)
Gallus gallus 123144 (+106974)
Bos taurus 121711 (+100591)
Canis lupus familiaris 116201 (+96039)
Caenorhabditis elegans 101115 (+5077)
Drosophila melanogaster 100344 (+602)
Saccharomyces cerevisiae S288C 68899 (+168)
Human immunodeficiency virus 1 237 (+237)
Hepatitis C virus subtype 2a 179 (+179)
Vaccinia virus 169 (+169)
Hepacivirus C 115 (+115)
Human alphaherpesvirus 1 106 (+106)
Jaagsiekte sheep retrovirus 102 (+102)
HIV-1 M:C_ETH2220 99 (+99)
Dengue virus group 91 (+91)
Pseudomonas aeruginosa 68 (+68)
Escherichia coli 60 (+60)
Human T-cell lymphotrophic virus type 1 (strain ATK) 57 (+57)
Simian virus 40 50 (+50)
Candida parapsilosis 50 (+50)
Salmonella enterica subsp. enterica serovar Typhi 42 (+42)
Yellow fever virus 41 (+41)
Human alphaherpesvirus 2 40 (+40)
Sindbis virus 37 (+37)
organism 37 (-841)
NCBITaxon:387139 29 (+29)
Bacillus megaterium 27 (+27)
Lactobacillus acidophilus 26 (+26)
Candida albicans 24 (+24)
Staphylococcus aureus subsp. aureus 21 (+21)
Staphylococcus aureus 20 (+20)
NCBITaxon:1322345 20 (+20)
NCBITaxon:1334565 19 (+19)
Salmonella 19 (+19)
Cutibacterium acnes 18 (+18)
Human respiratory syncytial virus B 18 (+18)
Murine leukemia virus 16 (+16)
NCBITaxon:70865 13 (+13)
NCBITaxon:536056 7 (+7)
Mus musculus domesticus 0 (-2181)
Other 0 (0)

Publication Gene By Source

Production Query

Dev Query

source count
Total 5087860 (-1194988)
https://data.monarchinitiative.org/ttl/ncbigene.ttl 4170437 (+125401)
https://data.monarchinitiative.org/ttl/go.ttl 1038405 (+229075)
https://data.monarchinitiative.org/ttl/flybase.ttl 96829 (-1892315)
https://data.monarchinitiative.org/ttl/sgd.ttl 86732 (0)
https://data.monarchinitiative.org/ttl/zfin.ttl 70438 (+103)
https://data.monarchinitiative.org/ttl/gwascatalog.ttl 59818 (+58909)
https://data.monarchinitiative.org/ttl/mgi.ttl 57835 (+46665)
https://data.monarchinitiative.org/ttl/clinvar.nt 52474 (+52474)
https://data.monarchinitiative.org/ttl/wormbase.ttl 36448 (+7921)
https://data.monarchinitiative.org/ttl/mgi_slim.ttl 31951 (+241)
https://data.monarchinitiative.org/ttl/omim.ttl 28373 (+760)
https://data.monarchinitiative.org/ttl/hgnc.ttl 27894 (+272)
https://data.monarchinitiative.org/ttl/ctd.ttl 24111 (+428)
https://data.monarchinitiative.org/ttl/zfinslim.ttl 13173 (+582)
https://data.monarchinitiative.org/ttl/mmrrc.ttl 7503 (+5266)
https://data.monarchinitiative.org/ttl/impc.ttl 4630 (+4491)
https://data.monarchinitiative.org/ttl/animalqtldb.ttl 4613 (0)
https://data.monarchinitiative.org/ttl/rgd.ttl 176 (+3)
https://data.monarchinitiative.org/ttl/hpoa.ttl 4 (0)
https://data.monarchinitiative.org/ttl/biogrid.ttl 0 (-317771)
https://data.monarchinitiative.org/ttl/clinvar.ttl 0 (-51789)
Other 0 (0)

Variant Disease Associations By Source

Production Query

Dev Query

source count
Total 112866 (+8233)
https://data.monarchinitiative.org/ttl/clinvar.nt 77859 (+77859)
https://data.monarchinitiative.org/ttl/gwascatalog.ttl 32750 (+4026)
https://data.monarchinitiative.org/ttl/coriell.ttl 1025 (0)
https://data.monarchinitiative.org/ttl/omim.ttl 1011 (-25)
https://data.monarchinitiative.org/ttl/udp.ttl 110 (0)
https://data.monarchinitiative.org/ttl/ctd.ttl 43 (0)
https://data.monarchinitiative.org/ttl/hpoa.ttl 35 (+35)
https://data.monarchinitiative.org/ttl/mgi.ttl 30 (0)
https://data.monarchinitiative.org/ttl/orphanet.ttl 3 (0)
https://data.monarchinitiative.org/ttl/mgi_slim.ttl 3 (0)
https://data.monarchinitiative.org/ttl/impc.ttl 1 (0)
https://data.monarchinitiative.org/ttl/clinvar.ttl 0 (-73667)
Other 0 (0)

Gene Anatomy By Taxa

Production Query

Dev Query

source count
Total 1862538 (+4067)
Mus musculus 550793 (+120807)
Homo sapiens 531837 (+3827)
Danio rerio 367207 (-20)
Drosophila melanogaster 197525 (-216)
Rattus norvegicus 142624 (0)
Caenorhabditis elegans 71709 (+1)
Escherichia coli 63 (+63)
Human immunodeficiency virus 1 60 (+60)
Human alphaherpesvirus 1 60 (+60)
Hepacivirus C 60 (+60)
Dengue virus group 40 (+40)
Hepatitis C virus subtype 2a 40 (+40)
Jaagsiekte sheep retrovirus 40 (+40)
Human T-cell lymphotrophic virus type 1 (strain ATK) 20 (+20)
Salmonella enterica subsp. enterica serovar Typhi 20 (+20)
Bacillus megaterium 20 (+20)
Candida parapsilosis 20 (+20)
Staphylococcus aureus subsp. aureus 20 (+20)
Candida albicans 20 (+20)
Human alphaherpesvirus 2 20 (+20)
Sindbis virus 20 (+20)
NCBITaxon:1334565 20 (+20)
NCBITaxon:387139 20 (+20)
Yellow fever virus 20 (+20)
Salmonella 20 (+20)
HIV-1 M:C_ETH2220 20 (+20)
Pseudomonas aeruginosa 20 (+20)
Lactobacillus acidophilus 20 (+20)
Vaccinia virus 20 (+20)
NCBITaxon:70865 20 (+20)
Murine leukemia virus 20 (+20)
Staphylococcus aureus 20 (+20)
Simian virus 40 20 (+20)
NCBITaxon:536056 20 (+20)
Human respiratory syncytial virus B 20 (+20)
NCBITaxon:1322345 20 (+20)
Cutibacterium acnes 20 (+20)
Other 0 (0)
Mus musculus domesticus 0 (-121175)

SciGraph Queries

Disease Phenotype Mix-ups

Production Query

Dev Query

field count
disease 131 (+3)

Genotypes

Production Query

Dev Query

field count
genotypes 335517 (-442294)

Genes in more than one taxa

Production Query

Dev Query

field count
request timeout 0

Variant Loci

Production Query

Dev Query

field count
variants 863211 (-3879)

Reagent Targeted Gene

Production Query

Dev Query

field count
rtg 106199 (-138469)

Sequence Features

Production Query

Dev Query

field count
features 7438399 (-1819110)

Genes

Production Query

Dev Query

field count
genes 1832017 (-667841)

Gene Variant Mix-ups

Production Query

Dev Query

field count
variant 5180 (-4)

Gene Disease Mix-ups

Production Query

Dev Query

field count
gene 143 (+143)

Number of edges connected to owl:Nothing

Production Query

Dev Query

field count
nothing 0 (0)

nodes with subClassOf cycles (depth 2)

Production Query

Dev Query

field count
node_count 804 (+803)