Solr Queries

Gene Phenotype Associations By Taxa

Production Query

Dev Query

species count
Total 788,481 (+11,451)
Mus musculus 245,697 (-305)
Homo sapiens 229,832 (+8,406)
Caenorhabditis elegans 80,708 (0)
Danio rerio 72,420 (+1,686)
Saccharomyces cerevisiae S288C 68,281 (0)
Drosophila melanogaster 66,721 (+283)
organism 19,618 (+1,677)
Rattus norvegicus 633 (+75)
Canis lupus familiaris 476 (0)
Drosophila hydei 463 (0)
Drosophila subobscura 377 (0)
Drosophila virilis 341 (0)
Drosophila ananassae 270 (0)
Drosophila simulans 208 (0)
Drosophila pseudoobscura pseudoobscura 206 (0)
Drosophila willistoni 193 (0)
Bos taurus 163 (0)
Drosophila robusta 153 (0)
Drosophila funebris 133 (0)
Felis catus 132 (0)
Drosophila busckii 124 (0)
Drosophila americana texana 118 (0)
Drosophila americana americana 82 (0)
Drosophila kikkawai 82 (0)
Drosophila immigrans 72 (0)
Scaptomyza pallida 69 (0)
Drosophila affinis 63 (0)
Ovis aries 57 (0)
Drosophila prosaltans 56 (0)
Drosophila buzzatii 55 (0)
Drosophila mauritiana 52 (0)
Drosophila paulistorum 49 (0)
Drosophila miranda 43 (0)
Drosophila littoralis 34 (0)
Drosophila bifasciata 33 (0)
Equus caballus 31 (0)
Sus scrofa 31 (0)
Drosophila ambigua 27 (0)
Drosophila transversa 22 (0)
Gallus gallus 19 (0)
Capra hircus 18 (0)
Phoenicopterus ruber 17 (0)
Drosophila biarmipes 15 (0)
Drosophila persimilis 14 (0)
Zaprionus indianus 14 (0)
Drosophila obscura 13 (0)
Drosophila phalerata 13 (0)
Drosophila mojavensis 12 (0)
Drosophila auraria 11 (0)
Drosophila mercatorum mercatorum 11 (0)
Drosophila tropicalis 10 (0)
Mustela putorius furo 10 (0)
Oryctolagus cuniculus 10 (0)
Drosophila sechellia 9 (0)
Drosophila aldrichi 7 (0)
Drosophila bipectinata 7 (0)
Drosophila repleta 7 (0)
Drosophila mediopunctata 6 (0)
Drosophila novamexicana 6 (0)
Drosophila crucigera 4 (0)
Drosophila gaucha 4 (0)
Drosophila pallidosa 4 (0)
Macaca mulatta 4 (0)
Neovison vison 4 (0)
Oryzias latipes 4 (0)
Scaptodrosophila rufifrons 4 (0)
Drosophila equinoxialis 3 (0)
Drosophila malerkotliana 3 (0)
Drosophila melanica 3 (0)
Drosophila metzii 3 (0)
Drosophila nigromaculata 3 (0)
Drosophila prostipennis 3 (0)
Drosophila pseudoobscura bogotana 3 (0)
Drosophila takahashii 3 (0)
Meleagris gallopavo 3 (0)
Mesocricetus auratus 3 (0)
Bubalus bubalis 2 (0)
Chymomyza costata 2 (0)
Drosophila acutilabella 2 (0)
Drosophila albomicans 2 (0)
Drosophila arizonae 2 (0)
Drosophila cardini 2 (0)
Drosophila elegans 2 (0)
Drosophila erecta 2 (0)
Drosophila eugracilis 2 (0)
Drosophila gibberosa 2 (0)
Drosophila madeirensis 2 (0)
Drosophila malerkotliana malerkotliana 2 (0)
Drosophila mimica 2 (0)
Drosophila nasuta 2 (0)
Drosophila nebulosa 2 (0)
Drosophila similis similis 2 (0)
Drosophila tripunctata 2 (0)
Scaptodrosophila lebanonensis 2 (0)
Vulpes vulpes 2 (0)
Acinonyx jubatus 1 (0)
Anser caerulescens caerulescens 1 (0)
Aspidoscelis inornatus 1 (0)
Bos grunniens 1 (0)
Chaetodipus intermedius 1 (0)
Coereba flaveola 1 (0)
Coturnix japonica 1 (0)
Drosophila ararama 1 (0)
Drosophila falleni 1 (0)
Drosophila guttifera 1 (0)
Drosophila lutescens 1 (0)
Drosophila mulleri 1 (0)
Drosophila nigrospiracula 1 (0)
Drosophila pachea 1 (0)
Drosophila tristis 1 (0)
Drosophila yakuba 1 (0)
Holbrookia maculata 1 (0)
Mammuthus primigenius 1 (0)
Micropterus salmoides 1 (0)
NCBITaxon:61402 1 (0)
Numida meleagris 1 (0)
Panthera onca 1 (0)
Panthera tigris tigris 1 (0)
Peromyscus polionotus 1 (0)
Schizosaccharomyces pombe 1 (0)
Schizosaccharomyces pombe 972h- 1 (0)
Sciurus carolinensis 1 (0)
Ursus americanus 1 (0)
Vulpes lagopus 1 (0)
Zaprionus sepsoides 1 (0)
Zaprionus tuberculatus 1 (0)
Other 0 (0)
Staphylococcus aureus 0 (-79)
Human immunodeficiency virus 1 0 (-63)
Candida albicans 0 (-34)
Human gammaherpesvirus 8 0 (-32)
Human alphaherpesvirus 2 0 (-30)
Listeria monocytogenes 0 (-30)
Serratia marcescens 0 (-30)
Hepacivirus C 0 (-21)
Pichia kudriavzevii 0 (-11)
Vaccinia virus 0 (-10)
Mycobacterium tuberculosis 0 (-8)
Human rhinovirus B3 0 (-6)
Escherichia coli ATCC 25922 0 (-5)
Human alphaherpesvirus 3 0 (-4)
Hepatitis C virus subtype 2a 0 (-2)
Jaagsiekte sheep retrovirus 0 (-2)
Salmonella 0 (-2)
Bacillus megaterium 0 (-1)
Dengue virus group 0 (-1)

Gene Phenotype Associations By Source

Production Query

Dev Query

source count
Total 788,481 (+11,451)
mgislim 243,824 (+50)
hpoa 165,438 (+7,249)
orphanet 134,416 (+5,661)
omim 98,713 (+3,234)
wormbase 80,587 (0)
flybase 75,012 (+242)
gwascatalog 73,840 (+2,487)
zfinslim 69,021 (+1,680)
sgd 68,275 (0)
clinvar 30,140 (+3,140)
impc 21,459 (-4)
mgi 20,734 (+14)
go 11,759 (-339)
zfin 9,257 (+16)
coriell 7,663 (-114)
mmrrc 7,381 (-355)
omia 1,009 (0)
monarch 988 (0)
rgd 628 (+75)
Other 0 (0)

Gene Variant Associations By Taxa

Production Query

Dev Query

species count
Total 988,548 (+14,266)
Mus musculus 463,026 (+5,752)
Homo sapiens 202,058 (+5,852)
Drosophila melanogaster 190,243 (+775)
Caenorhabditis elegans 63,343 (0)
Danio rerio 22,671 (+189)
Bos taurus 19,157 (0)
organism 17,468 (+2,103)
Sus scrofa 3,346 (+2)
Gallus gallus 1,647 (0)
Drosophila ananassae 601 (0)
Drosophila virilis 574 (0)
Drosophila subobscura 536 (0)
Drosophila hydei 523 (0)
Drosophila simulans 435 (0)
Drosophila pseudoobscura pseudoobscura 336 (0)
Equus caballus 235 (0)
Drosophila willistoni 206 (0)
Drosophila funebris 177 (0)
Drosophila americana texana 149 (0)
Drosophila kikkawai 123 (0)
Drosophila mauritiana 122 (0)
Drosophila robusta 122 (0)
Drosophila buzzatii 121 (0)
Drosophila americana americana 95 (0)
Drosophila immigrans 91 (0)
Drosophila busckii 88 (0)
Drosophila miranda 88 (0)
Drosophila affinis 58 (0)
Scaptomyza pallida 53 (0)
Zaprionus indianus 52 (0)
Drosophila mulleri 50 (0)
Drosophila mojavensis 45 (0)
Drosophila affinidisjuncta 42 (0)
Drosophila teissieri 41 (0)
Drosophila persimilis 39 (0)
Drosophila prosaltans 39 (0)
Drosophila littoralis 35 (0)
Drosophila paulistorum 32 (0)
Drosophila takahashii 30 (0)
Drosophila lutescens 27 (0)
Drosophila arizonae 26 (0)
Drosophila bifasciata 26 (0)
Drosophila sechellia 25 (+2)
Drosophila jambulina 24 (0)
Drosophila punjabiensis 24 (0)
Drosophila ambigua 19 (0)
Drosophila bipectinata 18 (0)
Drosophila phalerata 18 (0)
Drosophila transversa 17 (0)
Drosophila auraria 14 (0)
Drosophila biarmipes 14 (0)
Drosophila obscura 14 (0)
Drosophila hawaiiensis 12 (0)
Drosophila mercatorum mercatorum 12 (0)
Drosophila malerkotliana 9 (0)
Drosophila yakuba 9 (0)
Drosophila malerkotliana malerkotliana 8 (0)
Drosophila mediopunctata 8 (0)
Drosophila novamexicana 8 (0)
Ovis aries 7 (0)
Scaptodrosophila lebanonensis 7 (0)
Drosophila albomicans 6 (0)
Drosophila grimshawi 6 (0)
Drosophila prostipennis 6 (0)
Drosophila repleta 6 (0)
Drosophila tropicalis 6 (0)
Chymomyza costata 5 (0)
Drosophila pachea 5 (0)
Hirtodrosophila confusa 5 (0)
Drosophila aldrichi 4 (0)
Drosophila elegans 4 (0)
Drosophila eugracilis 4 (0)
Drosophila azteca 3 (0)
Drosophila metzii 3 (0)
Drosophila pallidosa 3 (0)
Drosophila crucigera 2 (0)
Drosophila equinoxialis 2 (0)
Drosophila erecta 2 (0)
Drosophila falleni 2 (0)
Drosophila gaucha 2 (0)
Drosophila madeirensis 2 (0)
Drosophila nasuta 2 (0)
Drosophila nigrospiracula 2 (0)
Drosophila pseudoobscura bogotana 2 (0)
Scaptodrosophila rufifrons 2 (0)
Zaprionus sepsoides 2 (0)
Zaprionus tuberculatus 2 (0)
Drosophila acutilabella 1 (0)
Drosophila ararama 1 (0)
Drosophila athabasca 1 (0)
Drosophila borealis 1 (0)
Drosophila cardini 1 (0)
Drosophila gibberosa 1 (0)
Drosophila guttifera 1 (0)
Drosophila melanica 1 (0)
Drosophila mimica 1 (0)
Drosophila nebulosa 1 (0)
Drosophila nigromaculata 1 (0)
Drosophila orena 1 (0)
Drosophila similis similis 1 (0)
Drosophila tripunctata 1 (0)
Drosophila tristis 1 (0)
Other 0 (0)
Staphylococcus aureus 0 (-140)
Human alphaherpesvirus 2 0 (-49)
Human gammaherpesvirus 8 0 (-47)
Hepacivirus C 0 (-27)
Human immunodeficiency virus 1 0 (-27)
Pichia kudriavzevii 0 (-23)
Serratia marcescens 0 (-21)
Escherichia coli ATCC 25922 0 (-11)
Human rhinovirus B3 0 (-10)
Mycobacterium tuberculosis 0 (-10)
Listeria monocytogenes 0 (-8)
Human gammaherpesvirus 4 0 (-6)
Vaccinia virus 0 (-6)
Human alphaherpesvirus 3 0 (-5)
Jaagsiekte sheep retrovirus 0 (-4)
Candida albicans 0 (-3)
Hepatitis C virus subtype 2a 0 (-3)
Pseudomonas aeruginosa 0 (-3)
Salmonella 0 (-3)
Bacillus megaterium 0 (-1)
Dengue virus group 0 (-1)
Human alphaherpesvirus 1 0 (-1)

Gene Variant Associations By Source

Production Query

Dev Query

source count
Total 988,548 (+14,266)
mgi 461,392 (+5,755)
flybase 201,402 (+733)
clinvar 92,296 (+6,462)
gwascatalog 92,072 (+2,216)
wormbase 63,339 (0)
omim 28,070 (-1,092)
animalqtldb 25,719 (+2)
zfin 22,987 (+187)
mmrrc 14,023 (-17)
impc 5,288 (0)
Other 0 (0)

Gene Disease Causal Associations By Taxa

Production Query

Dev Query

species count
Total 9,135 (+79)
Homo sapiens 9,129 (+94)
Mus musculus 6 (-3)
Other 0 (0)
Human gammaherpesvirus 8 0 (-3)
Candida albicans 0 (-2)
Listeria monocytogenes 0 (-2)
Serratia marcescens 0 (-2)
Hepacivirus C 0 (-1)
Human immunodeficiency virus 1 0 (-1)
Pichia kudriavzevii 0 (-1)

Gene Disease Causal Associations By Source

Production Query

Dev Query

species count
Total 9,135 (+79)
omim 6,191 (-5)
orphanet 6,174 (+30)
clinvar 974 (+85)
gwascatalog 9 (+1)
mgi 6 (0)
mgislim 6 (-3)
mmrrc 2 (0)
impc 1 (0)
Other 0 (0)

Gene Disease Non-causal Associations By Taxa

Production Query

Dev Query

species count
Total 28,150 (+236)
Homo sapiens 24,739 (-189)
organism 2,688 (+516)
Canis lupus familiaris 230 (0)
Bos taurus 120 (0)
Felis catus 62 (0)
Ovis aries 47 (0)
Gallus gallus 41 (0)
Equus caballus 39 (0)
Sus scrofa 38 (0)
Capra hircus 15 (0)
Oryctolagus cuniculus 12 (0)
Coturnix japonica 9 (0)
Equus asinus 5 (0)
Neovison vison 5 (0)
Bubalus bubalis 4 (0)
Mesocricetus auratus 4 (0)
Bos grunniens 3 (0)
Calidris pugnax 3 (0)
Macaca mulatta 3 (0)
Oryzias latipes 3 (0)
Vulpes lagopus 3 (0)
Acinonyx jubatus 2 (0)
Geospiza fortis 2 (0)
Macaca fascicularis 2 (0)
Mammuthus primigenius 2 (0)
Meleagris gallopavo 2 (0)
Mustela putorius furo 2 (0)
Vulpes vulpes 2 (0)
Aepyceros melampus 1 (0)
Anas platyrhynchos 1 (0)
Anser caerulescens caerulescens 1 (0)
Aspidoscelis inornatus 1 (0)
Astyanax 1 (0)
Balaenoptera acutorostrata 1 (0)
Balaenoptera omurai 1 (0)
Bos mutus 1 (0)
Camelus dromedarius 1 (0)
Canis latrans 1 (0)
Canis lupus 1 (0)
Catopuma temminckii 1 (0)
Cavia porcellus 1 (0)
Chaetodipus intermedius 1 (0)
Coereba flaveola 1 (0)
Columba livia 1 (0)
Coturnix coturnix 1 (0)
Ctenopharyngodon idella 1 (0)
Delphinapterus leucas 1 (0)
Delphinus capensis 1 (0)
Dromaius novaehollandiae 1 (0)
Elephas maximus 1 (0)
Falco cherrug 1 (0)
Falco rusticolus 1 (0)
Gorilla gorilla 1 (0)
Holbrookia maculata 1 (0)
Hylobates agilis 1 (0)
Hylobates lar 1 (0)
Lacerta 1 (0)
Leopardus colocolo 1 (0)
Leopardus geoffroyi 1 (0)
Leopardus guigna 1 (0)
Lipotes vexillifer 1 (0)
Macaca fuscata 1 (0)
Megaptera novaeangliae 1 (0)
Monarcha castaneiventris 1 (0)
NCBITaxon:61402 1 (0)
NCBITaxon:9870 1 (0)
Neophocaena phocaenoides 1 (0)
Numida meleagris 1 (0)
Oreochromis niloticus 1 (0)
Pan troglodytes 1 (0)
Panthera onca 1 (0)
Panthera pardus 1 (0)
Panthera tigris 1 (0)
Panthera tigris tigris 1 (0)
Peromyscus maniculatus 1 (0)
Peromyscus polionotus 1 (0)
Phoenicopterus ruber 1 (0)
Prionailurus bengalensis 1 (0)
Rattus norvegicus 1 (0)
Sapajus apella 1 (0)
Sciurus carolinensis 1 (0)
Spinus cucullatus 1 (0)
Stercorarius parasiticus 1 (0)
Streptopelia risoria 1 (0)
Sula leucogaster 1 (0)
Sula sula 1 (0)
Sus scrofa domesticus 1 (0)
Symphalangus syndactylus 1 (0)
Takifugu rubripes 1 (0)
Tursiops truncatus 1 (0)
Ursus americanus 1 (0)
Other 0 (0)
Staphylococcus aureus 0 (-48)
Hepacivirus C 0 (-5)
Human alphaherpesvirus 2 0 (-5)
Listeria monocytogenes 0 (-5)
Mycobacterium tuberculosis 0 (-4)
Pseudomonas aeruginosa 0 (-4)
Dengue virus group 0 (-3)
Human gammaherpesvirus 4 0 (-3)
Human gammaherpesvirus 8 0 (-3)
Human immunodeficiency virus 1 0 (-3)
Human alphaherpesvirus 3 0 (-2)
Bacillus megaterium 0 (-1)
Candida albicans 0 (-1)
Human alphaherpesvirus 1 0 (-1)
Jaagsiekte sheep retrovirus 0 (-1)
Pichia kudriavzevii 0 (-1)
Salmonella 0 (-1)

Gene Disease Non-Causal Associations By Source

Production Query

Dev Query

species count
Total 28,150 (+236)
gwascatalog 23,005 (+275)
omim 3,538 (-39)
orphanet 1,280 (+7)
omia 725 (0)
clinvar 160 (+14)
coriell 40 (-1)
udp 2 (0)
Other 0 (0)
mgi 0 (-2)
mgislim 0 (-2)

Gene Homology By Subject Taxa

Production Query

Dev Query

source count
Total 7,066,663 (+14,302)
Danio rerio 587,418 (+1,014)
Xenopus tropicalis 520,407 (+958)
Mus musculus 487,683 (+568)
Rattus norvegicus 481,840 (+1,415)
Equus caballus 468,361 (+737)
Sus scrofa 441,824 (+782)
Homo sapiens 410,615 (+1,753)
Monodelphis domestica 373,909 (+328)
Bos taurus 364,986 (+1,383)
Drosophila melanogaster 363,083 (+680)
Canis lupus familiaris 361,199 (+675)
Caenorhabditis elegans 350,656 (+558)
Gallus gallus 338,748 (+1,096)
Pan troglodytes 284,180 (+2,474)
Anolis carolinensis 274,766 (+236)
Macaca mulatta 262,210 (+277)
Felis catus 249,454 (+218)
Ornithorhynchus anatinus 202,389 (+222)
Dictyostelium discoideum 85,257 (+107)
Saccharomyces cerevisiae S288C 73,484 (+26)
Schizosaccharomyces pombe 972h- 51,174 (+1,843)
Schizosaccharomyces pombe 16,783 (-1,795)
Escherichia coli 8,698 (+9)
Arabidopsis thaliana 7,181 (+8)
organism 358 (+3)
Other 0 (0)
Staphylococcus aureus 0 (-289)
Mycobacterium tuberculosis 0 (-193)
Human immunodeficiency virus 1 0 (-139)
Human alphaherpesvirus 3 0 (-87)
Hepacivirus C 0 (-80)
Bacillus megaterium 0 (-68)
Serratia marcescens 0 (-39)
Salmonella 0 (-35)
Listeria monocytogenes 0 (-32)
Human alphaherpesvirus 1 0 (-31)
Dengue virus group 0 (-29)
Candida albicans 0 (-27)
Hepatitis C virus subtype 2a 0 (-22)
Human rhinovirus B3 0 (-22)
Lactobacillus acidophilus 0 (-21)
Pseudomonas aeruginosa 0 (-21)
Human gammaherpesvirus 8 0 (-18)
Pichia kudriavzevii 0 (-18)
Vaccinia virus 0 (-18)
Pseudomonas fluorescens 0 (-17)
Escherichia coli ATCC 25922 0 (-16)
Jaagsiekte sheep retrovirus 0 (-16)
Influenza A virus A
Human gammaherpesvirus 4 0 (-12)
Human alphaherpesvirus 2 0 (-10)

Gene Interactions By Source

Production Query

Dev Query

source count
Total 4,122,703 (+12,454)
string 3,112,559 (+372)
biogrid 1,182,502 (+12,364)
Other 0 (0)

Gene Interactions By Subject Taxa

Production Query

Dev Query

source count
Total 4,122,703 (+12,454)
Homo sapiens 1,601,887 (+9,411)
Mus musculus 775,911 (+504)
organism 555,137 (+541,882)
Drosophila melanogaster 474,928 (+3,874)
Caenorhabditis elegans 366,314 (+5,142)
Danio rerio 293,095 (+8)
Rattus norvegicus 55,428 (-541,624)
Other 3 (-9)
Hepacivirus C 0 (-835)
Human immunodeficiency virus 1 0 (-738)
Listeria monocytogenes 0 (-695)
Human alphaherpesvirus 1 0 (-473)
Dengue virus group 0 (-465)
Bacillus megaterium 0 (-372)
Human rhinovirus B3 0 (-353)
Hepatitis C virus subtype 2a 0 (-342)
Staphylococcus aureus 0 (-318)
Human alphaherpesvirus 3 0 (-271)
Mycobacterium tuberculosis 0 (-251)
Human gammaherpesvirus 8 0 (-237)
Human gammaherpesvirus 4 0 (-233)
Pseudomonas aeruginosa 0 (-201)
Vaccinia virus 0 (-184)
Escherichia coli ATCC 25922 0 (-138)
Serratia marcescens 0 (-126)
Influenza A virus A
Pichia kudriavzevii 0 (-89)
Human alphaherpesvirus 2 0 (-81)
Candida albicans 0 (-76)
Escherichia coli DH1 0 (-54)
Jaagsiekte sheep retrovirus 0 (-41)
Klebsiella pneumoniae 0 (-29)
Salmonella 0 (-12)
Lactobacillus acidophilus 0 (-11)
Pseudomonas fluorescens 0 (-1)

Gene Function By Taxa

Production Query

Dev Query

source count
Total 2,992,882 (-13,363)
Mus musculus 356,907 (+1,776)
Homo sapiens 330,136 (+3,307)
Rattus norvegicus 294,734 (-23,722)
organism 211,529 (+25,788)
Danio rerio 198,981 (+2,056)
Gallus gallus 163,126 (+4,308)
Bos taurus 146,482 (-1,398)
Sus scrofa 130,836 (+1,409)
Canis lupus familiaris 118,192 (+330)
Caenorhabditis elegans 106,591 (+574)
Drosophila melanogaster 104,150 (+723)
Saccharomyces cerevisiae S288C 70,450 (+134)
Aspergillus niger CBS 513.88 65,630 (+9)
Dictyostelium discoideum 62,586 (+178)
Aspergillus oryzae RIB40 59,316 (+9)
Aspergillus nidulans FGSC A4 55,128 (+8)
Aspergillus fumigatus 51,254 (+9)
NCBITaxon:46472 30,566 (+12)
NCBITaxon:75750 30,051 (+12)
Aspergillus flavus NRRL3357 27,725 (+12)
Aspergillus brasiliensis CBS 101740 27,677 (+13)
NCBITaxon:1137211 27,263 (+13)
NCBITaxon:767770 26,747 (+13)
NCBITaxon:1073089 26,580 (+13)
Aspergillus kawachii IFO 4308 26,438 (+14)
NCBITaxon:602072 26,395 (+13)
NCBITaxon:41063 26,311 (+13)
NCBITaxon:690307 25,114 (+12)
Aspergillus fischeri NRRL 181 24,564 (+15)
Aspergillus terreus NIH2624 24,507 (+13)
Aspergillus fumigatus A1163 22,738 (+12)
NCBITaxon:1160497 22,736 (+13)
Schizosaccharomyces pombe 972h- 22,602 (+1,127)
Aspergillus clavatus NRRL 1 21,990 (+14)
Schizosaccharomyces pombe 19,269 (-1,082)
Xenopus tropicalis 7,581 (-27,319)
Other 0 (0)
Human immunodeficiency virus 1 0 (-409)
Hepacivirus C 0 (-101)
Human gammaherpesvirus 8 0 (-101)
Dengue virus group 0 (-97)
Listeria monocytogenes 0 (-92)
Vaccinia virus 0 (-89)
Human rhinovirus B3 0 (-79)
Staphylococcus aureus 0 (-73)
Mycobacterium tuberculosis 0 (-63)
Escherichia coli ATCC 25922 0 (-61)
Human alphaherpesvirus 3 0 (-60)
Hepatitis C virus subtype 2a 0 (-58)
Candida albicans 0 (-56)
Pseudomonas aeruginosa 0 (-53)
Pichia kudriavzevii 0 (-51)
Bacillus megaterium 0 (-48)
Human gammaherpesvirus 4 0 (-46)
Human alphaherpesvirus 2 0 (-41)
Human alphaherpesvirus 1 0 (-40)
Jaagsiekte sheep retrovirus 0 (-30)
Hepatitis B virus 0 (-29)
Influenza A virus A
Salmonella 0 (-23)
Serratia marcescens 0 (-21)
Lactobacillus acidophilus 0 (-20)
Pseudomonas fluorescens 0 (-10)
Escherichia coli DH1 0 (-9)
Klebsiella pneumoniae 0 (-8)

Gene Anatomy By Taxa

Production Query

Dev Query

source count
Total 2,599,710 (+877)
Homo sapiens 681,125 (-30,480)
organism 652,822 (+181,228)
Mus musculus 620,104 (-32)
Danio rerio 363,741 (-5,198)
Drosophila melanogaster 197,129 (0)
Caenorhabditis elegans 71,618 (0)
Rattus norvegicus 13,171 (-143,828)
Other 0 (0)
Human immunodeficiency virus 1 0 (-140)
Hepacivirus C 0 (-80)
Staphylococcus aureus 0 (-60)
Bacillus megaterium 0 (-40)
Candida albicans 0 (-40)
Human alphaherpesvirus 3 0 (-40)
Pseudomonas aeruginosa 0 (-40)
Dengue virus group 0 (-20)
Escherichia coli ATCC 25922 0 (-20)
Hepatitis C virus subtype 2a 0 (-20)
Human alphaherpesvirus 1 0 (-20)
Human alphaherpesvirus 2 0 (-20)
Human gammaherpesvirus 4 0 (-20)
Human gammaherpesvirus 8 0 (-20)
Human rhinovirus B3 0 (-20)
Influenza A virus A
Jaagsiekte sheep retrovirus 0 (-20)
Lactobacillus acidophilus 0 (-20)
Listeria monocytogenes 0 (-20)
Mycobacterium tuberculosis 0 (-20)
Pichia kudriavzevii 0 (-20)
Salmonella 0 (-20)
Serratia marcescens 0 (-20)
Vaccinia virus 0 (-20)
Pseudomonas fluorescens 0 (-15)
Escherichia coli DH1 0 (-10)
Klebsiella pneumoniae 0 (-8)

Genotype Phenotype Associations By Taxa

Production Query

Dev Query

species count
Total 510,464 (+3,287)
Mus musculus 371,819 (-2,165)
Danio rerio 125,313 (+2,837)
organism 11,717 (+2,675)
Mus mouse, genus 1,559 (-60)
Mus musculus castaneus 14 (0)
Mus musculus molossinus 13 (0)
Mus musculus musculus x M. m. domesticus 12 (0)
Mus setulosus 8 (0)
Homo sapiens 3 (0)
Mus musculus musculus 3 (0)
Mus spretus 2 (0)
Mus musculus bactrianus 1 (0)
Other 0 (0)

Genotype Phenotype Associations By Source

Production Query

Dev Query

source count
Total 510,464 (+3,287)
mgi 350,956 (+460)
zfin 120,054 (+2,824)
impc 34,185 (0)
go 5,266 (+13)
coriell 3 (0)
Other 0 (0)
mgislim 0 (-10)

Model Disease Associations By Taxa

Production Query

Dev Query

species count
Total 33,286 (+46)
Homo sapiens 12,202 (+8)
Caenorhabditis elegans 9,174 (0)
Mus musculus 8,044 (-54)
Drosophila melanogaster 1,546 (+32)
Danio rerio 1,163 (+2)
Canis lupus familiaris 684 (-1)
organism 196 (+61)
Bos taurus 115 (0)
Felis catus 55 (0)
Equus caballus 34 (0)
Caprinae 32 (0)
Mus mouse, genus 19 (-1)
Sus scrofa 10 (0)
Gallus gallus 3 (0)
Bos 2 (0)
Mus musculus musculus x M. m. domesticus 2 (0)
Other 2 (-1)
Bovinae 1 (0)
Equus genus 1 (0)
Mus musculus castaneus 1 (0)

Model Disease Associations By Source

Production Query

Dev Query

source count
Total 33,286 (+46)
coriell 12,205 (+8)
wormbase 9,174 (0)
mgi 8,262 (+6)
flybase 1,546 (+32)
zfin 1,165 (+1)
omia 934 (-1)
Other 0 (0)

Disease Phenotype Associations By Taxa

Production Query

Dev Query

species count
Total 177,866 (+7,156)
Other 177,866 (+7,156)

Disease Phenotype Associations By Source

Production Query

Dev Query

species count
Total 177,866 (+7,156)
hpoa 175,788 (+7,156)
monarch 1,804 (0)
omia 221 (0)
Other 0 (0)

Variant Genotype Associations By Taxa

Production Query

Dev Query

species count
Total 628,266 (+1,136)
Mus musculus 540,320 (-231)
Danio rerio 78,164 (+530)
Homo sapiens 4,880 (0)
organism 4,381 (+849)
Mus mouse, genus 478 (-12)
Mus setulosus 13 (0)
Mus musculus molossinus 9 (0)
Mus musculus bactrianus 4 (0)
Rattus norvegicus 4 (0)
Mus musculus musculus 3 (0)
Mus spretus 3 (0)
Mus musculus castaneus 2 (0)
Bos taurus 1 (0)
Cricetulus griseus 1 (0)
Macaca mulatta 1 (0)
Plecturocebus moloch 1 (0)
Saguinus labiatus 1 (0)
Other 0 (0)

Variant Genotype Associations By Source

Production Query

Dev Query

source count
Total 628,266 (+1,136)
mmrrc 372,839 (+301)
mgi 173,924 (+453)
zfin 78,164 (+530)
impc 39,884 (-1)
coriell 4,917 (0)
udp 112 (0)
Other 0 (0)

Variant Phenotype Associations By Taxa

Production Query

Dev Query

species count
Total 1,052,015 (+33,208)
Mus musculus 437,138 (+537)
Drosophila melanogaster 142,828 (+550)
Bos taurus 134,584 (+25,489)
Homo sapiens 132,356 (+4,199)
Caenorhabditis elegans 108,238 (0)
Danio rerio 63,401 (+2,484)
Sus scrofa 16,585 (0)
Gallus gallus 8,204 (0)
Ovis aries 1,601 (0)
Equus caballus 1,327 (+5)
Drosophila hydei 657 (0)
Drosophila subobscura 602 (0)
Drosophila virilis 599 (0)
organism 587 (-56)
Drosophila ananassae 422 (0)
Drosophila pseudoobscura pseudoobscura 324 (0)
Drosophila simulans 283 (0)
Drosophila willistoni 258 (0)
Drosophila funebris 229 (0)
Drosophila americana texana 206 (0)
Drosophila robusta 156 (0)
Drosophila busckii 142 (0)
Drosophila immigrans 108 (0)
Drosophila americana americana 100 (0)
Drosophila kikkawai 95 (0)
Drosophila affinis 76 (0)
Drosophila mauritiana 76 (0)
Scaptomyza pallida 71 (0)
Drosophila prosaltans 68 (0)
Drosophila buzzatii 67 (0)
Drosophila miranda 65 (0)
Drosophila paulistorum 60 (0)
Zaprionus indianus 52 (0)
Drosophila littoralis 45 (0)
Drosophila persimilis 39 (0)
Drosophila bifasciata 35 (0)
Drosophila mojavensis 34 (0)
Drosophila ambigua 28 (0)
Drosophila transversa 22 (0)
Drosophila auraria 18 (0)
Drosophila biarmipes 18 (0)
Drosophila obscura 14 (0)
Drosophila phalerata 13 (0)
Drosophila bipectinata 11 (0)
Drosophila mercatorum mercatorum 11 (0)
Drosophila tropicalis 10 (0)
Drosophila malerkotliana 9 (0)
Drosophila mediopunctata 9 (0)
Drosophila sechellia 9 (0)
Drosophila takahashii 8 (0)
Drosophila aldrichi 7 (0)
Drosophila novamexicana 7 (0)
Drosophila repleta 7 (0)
Drosophila prostipennis 6 (0)
Drosophila albomicans 5 (0)
Drosophila crucigera 4 (0)
Drosophila elegans 4 (0)
Drosophila eugracilis 4 (0)
Drosophila gaucha 4 (0)
Drosophila pallidosa 4 (0)
Scaptodrosophila rufifrons 4 (0)
Drosophila equinoxialis 3 (0)
Drosophila melanica 3 (0)
Drosophila metzii 3 (0)
Drosophila nigromaculata 3 (0)
Drosophila pachea 3 (0)
Drosophila pseudoobscura bogotana 3 (0)
Chymomyza costata 2 (0)
Drosophila acutilabella 2 (0)
Drosophila arizonae 2 (0)
Drosophila cardini 2 (0)
Drosophila erecta 2 (0)
Drosophila falleni 2 (0)
Drosophila gibberosa 2 (0)
Drosophila madeirensis 2 (0)
Drosophila malerkotliana malerkotliana 2 (0)
Drosophila mimica 2 (0)
Drosophila nasuta 2 (0)
Drosophila nebulosa 2 (0)
Drosophila nigrospiracula 2 (0)
Drosophila similis similis 2 (0)
Drosophila tripunctata 2 (0)
Drosophila yakuba 2 (0)
Scaptodrosophila lebanonensis 2 (0)
Zaprionus sepsoides 2 (0)
Zaprionus tuberculatus 2 (0)
Drosophila ararama 1 (0)
Drosophila guttifera 1 (0)
Drosophila lutescens 1 (0)
Drosophila mulleri 1 (0)
Drosophila tristis 1 (0)
Other 0 (0)

Variant Phenotype Associations By Source

Production Query

Dev Query

source count
Total 1,052,015 (+33,208)
mgi 420,052 (+660)
animalqtldb 162,301 (+25,494)
flybase 147,994 (+494)
gwascatalog 128,742 (+4,189)
wormbase 106,355 (0)
zfin 63,403 (+2,484)
go 22,480 (+34)
impc 20,923 (0)
udp 3,399 (-12)
clinvar 212 (+22)
coriell 3 (0)
Other 0 (0)
mgislim 0 (-29,966)

Variant Disease Associations By Taxa

Production Query

Dev Query

species count
Total 185,712 (+11,461)
Homo sapiens 182,776 (+11,429)
Drosophila melanogaster 1,546 (+32)
Mus musculus 1,390 (0)
Other 0 (0)

Variant Disease Associations By Source

Production Query

Dev Query

source count
Total 185,712 (+11,461)
clinvar 143,165 (+10,885)
gwascatalog 39,066 (+545)
flybase 1,546 (+32)
mgi 1,390 (0)
coriell 472 (0)
udp 60 (0)
omim 13 (-1)
Other 0 (0)
mgislim 0 (-3)

Publication Variant By Source

Production Query

Dev Query

source count
Total 5,638,783 (+88,669)
ncbigene 4,565,051 (+21,849)
animalqtldb 318,707 (+46,650)
clinvar 218,464 (+16,529)
gwascatalog 147,455 (+4,023)
flybase 137,171 (+283)
mgi 92,640 (+147)
wormbase 54,929 (0)
zfin 46,967 (+493)
omim 43,139 (-1,885)
hgnc 32,188 (+31)
coriell 29,049 (+67)
go 18,218 (-42)
kegg 6,336 (+27)
omia 5,191 (0)
mmrrc 3,824 (+6)
biogrid 158 (+35)
Other 0 (0)
mgislim 0 (-4,900)

Publication Gene By Source

Production Query

Dev Query

source count
Total 5,697,420 (+29,202)
ncbigene 4,456,437 (+20,592)
go 1,282,672 (+6,052)
biogrid 409,023 (+3,483)
gwascatalog 91,174 (+2,575)
flybase 89,180 (+174)
sgd 86,791 (0)
zfin 73,616 (+296)
mgi 72,193 (+300)
clinvar 59,638 (+2,647)
mgislim 39,589 (-20)
wormbase 38,298 (0)
hgnc 31,018 (-417)
omim 28,347 (-1,287)
zfinslim 14,231 (+151)
mmrrc 10,342 (+22)
impc 7,094 (-1)
animalqtldb 5,176 (+6)
rgd 219 (+17)
hpoa 1 (-1)
Other 0 (0)

Publication Phenotype By Source

Production Query

Dev Query

source count
Total 5,697,420 (+29,202)
ncbigene 4,456,437 (+20,592)
go 1,282,672 (+6,052)
biogrid 409,023 (+3,483)
gwascatalog 91,174 (+2,575)
flybase 89,180 (+174)
sgd 86,791 (0)
zfin 73,616 (+296)
mgi 72,193 (+300)
clinvar 59,638 (+2,647)
mgislim 39,589 (-20)
wormbase 38,298 (0)
hgnc 31,018 (-417)
omim 28,347 (-1,287)
zfinslim 14,231 (+151)
mmrrc 10,342 (+22)
impc 7,094 (-1)
animalqtldb 5,176 (+6)
rgd 219 (+17)
hpoa 1 (-1)
Other 0 (0)

Publication Genotype By Source

Production Query

Dev Query

source count
Total 127,792 (+553)
mgi 81,926 (+78)
zfin 31,814 (+454)
coriell 9,959 (+10)
go 4,093 (+11)
Other 0 (0)

Publication Disease By Source

Production Query

Dev Query

source count
Total 362,981 (+5,423)
zfin 102,369 (+1,055)
ctd 92,137 (+256)
clinvar 81,858 (+3,942)
wormbase 47,248 (+218)
go 34,900 (+23)
ncbigene 27,721 (+94)
mgi 13,986 (-184)
omia 13,940 (-2)
flybase 4,433 (+62)
coriell 4,085 (+6)
biogrid 3,809 (+212)
gwascatalog 2,627 (+28)
hpoa 2,007 (+327)
mmrrc 253 (0)
monarch 184 (0)
mgislim 6 (-762)
Other 0 (0)

Publication Model By Source

Production Query

Dev Query

source count
Total 59,137 (-429)
wormbase 25,116 (+245)
go 19,138 (+65)
mgi 14,312 (-804)
ncbigene 13,283 (+115)
coriell 9,020 (+10)
flybase 4,670 (+92)
zfin 3,384 (+28)
omia 2,635 (0)
biogrid 2,235 (+187)
mmrrc 193 (0)
Other 0 (0)
mgislim 0 (-799)

Case Model By Source

Production Query

Dev Query

source count
coriell 30,624 (+21)
Total 30,624 (+21)
Other 0 (0)

Case Disease By Source

Production Query

Dev Query

source count
Total 0 (0)
Other 0 (0)

Case Variant By Source

Production Query

Dev Query

source count
udp 112 (0)
Total 112 (0)
Other 0 (0)

Case Genotype By Source

Production Query

Dev Query

source count
coriell 2,961 (0)
Total 2,961 (0)
Other 0 (0)

Case Gene By Source

Production Query

Dev Query

source count
omim 2 (0)
udp 2 (0)
Total 2 (0)
Other 0 (0)

Case Phenotype By Source

Production Query

Dev Query

source count
udp 1,071 (-4)
Total 1,071 (-4)
Other 0 (0)

Gene Pathway By Source

Production Query

Dev Query

source count
reactome 428,126 (-33,797)
Total 428,126 (-33,797)
ensembl 94,595 (-41)
Other 0 (0)

Gene Pathway By Taxa

Production Query

Dev Query

source count
Total 428,126 (-33,797)
organism 211,529 (+25,788)
Homo sapiens 41,836 (+201)
Mus musculus 30,090 (+16)
Danio rerio 26,005 (0)
Sus scrofa 25,296 (-295)
Canis lupus familiaris 25,198 (-599)
Bos taurus 17,715 (-4,873)
Gallus gallus 15,557 (-255)
Drosophila melanogaster 12,629 (0)
Caenorhabditis elegans 12,600 (0)
Xenopus tropicalis 7,581 (-27,319)
Rattus norvegicus 2,090 (-26,269)
Other 0 (0)
Human immunodeficiency virus 1 0 (-31)
Human gammaherpesvirus 8 0 (-19)
Dengue virus group 0 (-17)
Bacillus megaterium 0 (-15)
Pseudomonas aeruginosa 0 (-15)
Hepacivirus C 0 (-12)
Staphylococcus aureus 0 (-10)
Mycobacterium tuberculosis 0 (-9)
Human gammaherpesvirus 4 0 (-8)
Hepatitis C virus subtype 2a 0 (-7)
Vaccinia virus 0 (-7)
Human alphaherpesvirus 1 0 (-6)
Escherichia coli ATCC 25922 0 (-5)
Human rhinovirus B3 0 (-5)
Human alphaherpesvirus 2 0 (-3)
Human alphaherpesvirus 3 0 (-3)
Salmonella 0 (-3)
Candida albicans 0 (-2)
Escherichia coli DH1 0 (-2)
Klebsiella pneumoniae 0 (-2)
Listeria monocytogenes 0 (-2)
Pichia kudriavzevii 0 (-2)
Serratia marcescens 0 (-2)
Hepatitis B virus 0 (-1)
Influenza A virus A
Jaagsiekte sheep retrovirus 0 (-1)
Lactobacillus acidophilus 0 (-1)
Pseudomonas fluorescens 0 (-1)

Pathway Phenotype By Source

Production Query

Dev Query

source count
reactome 648,060 (+2,789)
Total 648,060 (+2,789)
ensembl 615,795 (+3,962)
mgi 483,012 (+868)
mgislim 406,615 (+436)
zfin 153,980 (+3,591)
zfinslim 98,522 (+2,609)
go 77,981 (+748)
mmrrc 68,143 (-104)
impc 38,854 (0)
hpoa 346 (-21)
Other 0 (0)
rgd 0 (-1,404)

Relations

Production Query

Dev Query

relation count
Total 35,719,443 (+210,957)
is_about 9,098,431 (+40,964)
interacts with 3,982,291 (+12,415)
in orthology relationship with 3,892,911 (+10,066)
in 1 to 1 orthology relationship with 3,173,752 (+4,236)
source 3,130,678 (+3,130,678)
has phenotype 2,816,067 (+25,671)
expressed in 2,599,710 (+877)
involved_in 2,021,133 (-59,586)
Other 1,642,274 (+17,199)
enables 755,209 (+7,532)
is part of 675,871 (+5,145)
is_allele_of 445,829 (+4,699)
has_affected_feature 411,217 (+9,419)
contributes to condition 267,378 (+7,394)
is marker for 162,710 (+25,504)
colocalizes with 107,335 (+33)
pathogenic_for_condition 103,748 (+8,100)
mentions 101,727 (+452)
is_reference_allele_of 60,368 (-7)
is_expression_variant_of 53,175 (0)
has role in modeling 44,257 (+86)
has_genotype 42,442 (+159)
likely_pathogenic_for_condition 39,738 (+2,815)
genetically interacts with 33,077 (+6)
derives_from 30,624 (+21)
targets_gene 17,957 (+155)
causes condition 5,041 (+86)
is causal germline mutation in 2,239 (+75)
contributes to 1,042 (-33)
is causal loss of function germline mutation of in 473 (+7)
is causal susceptibility factor for 435 (-1)
is causal somatic mutation in 149 (+4)
is causal gain of function germline mutation of in 70 (+1)
disease has basis in feature 53 (0)
is causal germline mutation partially giving rise to 30 (0)
is_variant_allele_of 2 (0)
Source 0 (-3,043,215)