Solr Queries

Gene Phenotype Associations By Taxa

Production Query

Dev Query

species count
Total 764282 (+31686)
Mus musculus 281292 (+64530)
Homo sapiens 158236 (-53748)
Danio rerio 87866 (+18548)
Caenorhabditis elegans 80708 (+1860)
Drosophila melanogaster 71155 (+399)
Saccharomyces cerevisiae S288C 68230 (0)
organism 11269 (+148)
Rattus norvegicus 545 (+5)
Canis lupus familiaris 476 (0)
Drosophila hydei 468 (0)
Drosophila subobscura 377 (0)
Drosophila virilis 342 (0)
Drosophila ananassae 270 (0)
Drosophila simulans 208 (0)
Drosophila pseudoobscura pseudoobscura 206 (0)
Drosophila willistoni 194 (0)
Bos taurus 163 (0)
Drosophila robusta 153 (0)
Drosophila funebris 133 (0)
Felis catus 132 (0)
Drosophila busckii 124 (0)
Drosophila americana texana 118 (0)
Hepatitis C virus subtype 2a 100 (+100)
Drosophila americana americana 82 (0)
Drosophila kikkawai 82 (0)
Staphylococcus aureus 79 (+4)
Drosophila immigrans 72 (0)
Scaptomyza pallida 69 (0)
Drosophila affinis 63 (0)
Ovis aries 57 (0)
Drosophila prosaltans 56 (0)
Drosophila buzzatii 55 (0)
Escherichia coli 53 (+49)
Drosophila mauritiana 52 (0)
Drosophila paulistorum 49 (0)
Drosophila miranda 43 (0)
Bacillus subtilis subsp. subtilis str. JH642 37 (+37)
Drosophila littoralis 34 (0)
Drosophila bifasciata 33 (0)
Human gammaherpesvirus 8 32 (0)
Equus caballus 31 (0)
Sus scrofa 31 (0)
Drosophila ambigua 27 (0)
Drosophila transversa 22 (0)
Salmonella enterica subsp. enterica serovar Typhi 22 (+22)
Gallus gallus 19 (0)
Hepacivirus C 19 (-4)
Listeria innocua 19 (+18)
Capra hircus 18 (0)
Phoenicopterus ruber 17 (0)
Human immunodeficiency virus 1 16 (-52)
Drosophila biarmipes 15 (0)
Drosophila persimilis 14 (0)
Zaprionus indianus 14 (0)
Drosophila obscura 13 (0)
Drosophila phalerata 13 (0)
Drosophila mojavensis 12 (0)
Drosophila auraria 11 (0)
Drosophila mercatorum mercatorum 11 (0)
Drosophila tropicalis 10 (0)
Mustela putorius furo 10 (0)
Oryctolagus cuniculus 10 (0)
Yellow fever virus 10 (+10)
Drosophila sechellia 9 (0)
Drosophila aldrichi 7 (0)
Drosophila bipectinata 7 (0)
Drosophila repleta 7 (0)
Drosophila mediopunctata 6 (0)
Drosophila novamexicana 6 (0)
Alphainfluenzavirus 4 (+3)
Drosophila crucigera 4 (0)
Drosophila gaucha 4 (0)
Drosophila pallidosa 4 (0)
Macaca mulatta 4 (0)
Neovison vison 4 (0)
Oryzias latipes 4 (0)
Scaptodrosophila rufifrons 4 (0)
Bacillus megaterium 3 (+3)
Drosophila equinoxialis 3 (0)
Drosophila malerkotliana 3 (0)
Drosophila melanica 3 (0)
Drosophila metzii 3 (0)
Drosophila nigromaculata 3 (0)
Drosophila prostipennis 3 (0)
Drosophila pseudoobscura bogotana 3 (0)
Drosophila takahashii 3 (0)
Meleagris gallopavo 3 (0)
Mesocricetus auratus 3 (0)
Bubalus bubalis 2 (0)
Chymomyza costata 2 (0)
Drosophila acutilabella 2 (0)
Drosophila albomicans 2 (0)
Drosophila arizonae 2 (0)
Drosophila cardini 2 (0)
Drosophila elegans 2 (0)
Drosophila erecta 2 (0)
Drosophila eugracilis 2 (0)
Drosophila gibberosa 2 (0)
Drosophila madeirensis 2 (0)
Drosophila malerkotliana malerkotliana 2 (0)
Drosophila mimica 2 (0)
Drosophila nasuta 2 (0)
Drosophila nebulosa 2 (0)
Drosophila similis similis 2 (0)
Drosophila tripunctata 2 (0)
Hepatitis C virus subtype 1b 2 (+2)
Scaptodrosophila lebanonensis 2 (0)
Vulpes vulpes 2 (0)
Acinonyx jubatus 1 (0)
Anser caerulescens caerulescens 1 (0)
Aspidoscelis inornatus 1 (0)
Bacillus subtilis 1 (0)
Bos grunniens 1 (0)
Chaetodipus intermedius 1 (0)
Coereba flaveola 1 (0)
Coturnix japonica 1 (0)
Dengue virus group 1 (+1)
Drosophila ararama 1 (0)
Drosophila falleni 1 (0)
Drosophila guttifera 1 (0)
Drosophila lutescens 1 (0)
Drosophila mulleri 1 (0)
Drosophila nigrospiracula 1 (0)
Drosophila pachea 1 (0)
Drosophila tristis 1 (0)
Drosophila yakuba 1 (0)
Holbrookia maculata 1 (0)
Human alphaherpesvirus 1 1 (-69)
Jaagsiekte sheep retrovirus 1 (+1)
Listeria monocytogenes 1 (-29)
Mammuthus primigenius 1 (0)
Micropterus salmoides 1 (0)
NCBITaxon:61402 1 (0)
Neisseria gonorrhoeae MS11 1 (+1)
Numida meleagris 1 (0)
Panthera onca 1 (0)
Panthera tigris tigris 1 (0)
Peromyscus polionotus 1 (0)
Salmonella 1 (+1)
Schizosaccharomyces pombe 1 (0)
Schizosaccharomyces pombe 972h- 1 (-1)
Sciurus carolinensis 1 (0)
Ursus americanus 1 (0)
Vulpes lagopus 1 (0)
Zaprionus sepsoides 1 (0)
Zaprionus tuberculatus 1 (0)
Other 0 (0)
Paracoccidioides brasiliensis Pb18 0 (-46)
Candida albicans 0 (-35)
Micrococcus luteus 0 (-18)
Human betaherpesvirus 5 0 (-17)
HIV-1 M:B_HXB2R 0 (-12)
Human herpesvirus 5 strain AD169 0 (-8)
Simian virus 40 0 (-7)
Hepatitis B virus 0 (-5)
Mycobacterium tuberculosis 0 (-3)
Human papillomavirus type 16 0 (-2)

Gene Phenotype Associations By Source

Production Query

Dev Query

source count
Total 764282 (+31686)
_:37bda355ba8dd72483ee0ec97e9bbda8 275880 (+275880)
_:913675a0c380485a5d76fc807ccec155 217940 (+217940)
_:a0e0ed2aa6309eca687972850d482a07 96713 (+96713)
_:3c74d6eeced389fabe0088ce714b37ef 95359 (+95359)
_:100a977eb54a13b07456cdc90b506df3 93431 (+93431)
_:aea2f35c3dff7d0079035749545c6aec 80587 (+80587)
_:f006f58a31221b39ef559267933e4f4b 79592 (+79592)
_:7952921eaef2070fa4c9a066f03039b1 68224 (+68224)
_:64082e181f6ac24131c4954122dc2897 67129 (+67129)
_:f64e326af1a24847d75d908c181684ad 62760 (+62760)
_:1aff771688d9b6c7d433994cefd59876 57043 (+57043)
_:d6e0cc2e1de07d48b9db78cf18fb12c3 30436 (+30436)
_:d60265d050254c54454c031c67f6e15c 27730 (+27730)
clinvar 26390 (+2176)
_:cf322ec174661c7bcb8db5dd85176603 7771 (+7771)
_:f2d87dc8e90aed1d4d9c627457494c63 1009 (+1009)
_:3a7ec002fdd89bb6c0c58373c8a65f94 988 (+988)
_:31b7c1c49cb9b83dde7d6a0ddc25b476 540 (+540)
Other 0 (0)
mgislim 0 (-214497)
hpoa 0 (-154182)
orphanet 0 (-125180)
omim 0 (-92237)
flybase 0 (-79201)
wormbase 0 (-78727)
sgd 0 (-68224)
zfinslim 0 (-65966)
gwascatalog 0 (-59028)
impc 0 (-19741)
mgi 0 (-18926)
go 0 (-11815)
zfin 0 (-9250)
coriell 0 (-7514)
mmrrc 0 (-6916)
omia 0 (-1009)
monarch 0 (-988)
rgd 0 (-535)

Gene Variant Associations By Taxa

Production Query

Dev Query

species count
Total 951974 (+14934)
Mus musculus 449314 (+1332)
Homo sapiens 190110 (+9066)
Drosophila melanogaster 189468 (+1728)
Caenorhabditis elegans 63343 (+1887)
Danio rerio 22323 (+875)
Bos taurus 19157 (0)
organism 7231 (+7)
Sus scrofa 3344 (0)
Gallus gallus 1647 (0)
Drosophila ananassae 601 (0)
Drosophila virilis 574 (+2)
Drosophila subobscura 536 (0)
Drosophila hydei 523 (0)
Drosophila simulans 435 (+2)
Drosophila pseudoobscura pseudoobscura 336 (+4)
Equus caballus 235 (0)
Drosophila willistoni 206 (0)
Drosophila funebris 177 (0)
Drosophila americana texana 149 (0)
Staphylococcus aureus 139 (+8)
Drosophila kikkawai 123 (0)
Drosophila mauritiana 122 (0)
Drosophila robusta 122 (0)
Drosophila buzzatii 121 (0)
Drosophila americana americana 95 (0)
Drosophila immigrans 91 (0)
Bacillus subtilis subsp. subtilis str. JH642 88 (+88)
Drosophila busckii 88 (0)
Drosophila miranda 88 (0)
Drosophila affinis 58 (0)
Scaptomyza pallida 53 (0)
Zaprionus indianus 52 (0)
Drosophila mulleri 50 (0)
Human gammaherpesvirus 8 47 (0)
Drosophila mojavensis 45 (0)
Drosophila affinidisjuncta 42 (0)
Drosophila teissieri 41 (0)
Hepacivirus C 40 (-7)
Drosophila persimilis 39 (0)
Drosophila prosaltans 39 (0)
Escherichia coli 36 (+31)
Drosophila littoralis 35 (0)
Drosophila paulistorum 32 (0)
Drosophila takahashii 30 (0)
Hepatitis C virus subtype 2a 28 (+28)
Drosophila lutescens 27 (0)
Drosophila arizonae 26 (0)
Drosophila bifasciata 26 (0)
Drosophila jambulina 24 (0)
Drosophila punjabiensis 24 (0)
Drosophila sechellia 23 (0)
Drosophila ambigua 19 (0)
Drosophila bipectinata 18 (0)
Drosophila phalerata 18 (0)
Drosophila transversa 17 (0)
Human immunodeficiency virus 1 17 (-13)
Drosophila auraria 14 (0)
Drosophila biarmipes 14 (0)
Drosophila obscura 14 (0)
Salmonella enterica subsp. enterica serovar Typhi 13 (+13)
Drosophila hawaiiensis 12 (0)
Drosophila mercatorum mercatorum 12 (0)
Yellow fever virus 12 (+12)
Listeria innocua 10 (+9)
Drosophila malerkotliana 9 (0)
Drosophila yakuba 9 (0)
Drosophila malerkotliana malerkotliana 8 (0)
Drosophila mediopunctata 8 (0)
Drosophila novamexicana 8 (0)
Ovis aries 7 (0)
Scaptodrosophila lebanonensis 7 (0)
Drosophila albomicans 6 (0)
Drosophila grimshawi 6 (0)
Drosophila prostipennis 6 (0)
Drosophila repleta 6 (0)
Drosophila tropicalis 6 (0)
Jaagsiekte sheep retrovirus 6 (+6)
Chymomyza costata 5 (0)
Drosophila pachea 5 (0)
Hirtodrosophila confusa 5 (0)
Drosophila aldrichi 4 (0)
Drosophila elegans 4 (0)
Drosophila eugracilis 4 (0)
Drosophila azteca 3 (0)
Drosophila metzii 3 (0)
Drosophila pallidosa 3 (0)
Bacillus megaterium 2 (+2)
Drosophila crucigera 2 (0)
Drosophila equinoxialis 2 (0)
Drosophila erecta 2 (0)
Drosophila falleni 2 (0)
Drosophila gaucha 2 (0)
Drosophila madeirensis 2 (0)
Drosophila nasuta 2 (0)
Drosophila nigrospiracula 2 (0)
Drosophila pseudoobscura bogotana 2 (0)
Hepatitis C virus subtype 1b 2 (+2)
Murine rotavirus EDIM 2 (0)
Salmonella 2 (+2)
Scaptodrosophila rufifrons 2 (0)
Zaprionus sepsoides 2 (0)
Zaprionus tuberculatus 2 (0)
Alphainfluenzavirus 1 (0)
Bacillus subtilis 1 (0)
Dengue virus group 1 (+1)
Drosophila acutilabella 1 (0)
Drosophila ararama 1 (0)
Drosophila athabasca 1 (0)
Drosophila borealis 1 (0)
Drosophila cardini 1 (0)
Drosophila gibberosa 1 (0)
Drosophila guttifera 1 (0)
Drosophila melanica 1 (0)
Drosophila mimica 1 (0)
Drosophila nebulosa 1 (0)
Drosophila nigromaculata 1 (0)
Drosophila orena 1 (0)
Drosophila similis similis 1 (0)
Drosophila tripunctata 1 (0)
Drosophila tristis 1 (0)
Human alphaherpesvirus 1 1 (-33)
Listeria monocytogenes 1 (-7)
Neisseria gonorrhoeae MS11 1 (+1)
Other 0 (0)
Paracoccidioides brasiliensis Pb18 0 (-27)
Human betaherpesvirus 5 0 (-12)
HIV-1 M:B_HXB2R 0 (-11)
Human herpesvirus 5 strain AD169 0 (-11)
Micrococcus luteus 0 (-10)
Simian virus 40 0 (-9)
Escherichia coli DH1 0 (-8)
Human gammaherpesvirus 4 0 (-6)
Mycobacterium tuberculosis 0 (-6)
Candida albicans 0 (-4)
Hepatitis B virus 0 (-4)
Human papillomavirus type 16 0 (-3)
Pseudomonas aeruginosa 0 (-1)

Gene Variant Associations By Source

Production Query

Dev Query

source count
Total 951974 (+14934)
_:37bda355ba8dd72483ee0ec97e9bbda8 447677 (+447677)
_:f006f58a31221b39ef559267933e4f4b 200669 (+200669)
clinvar 81888 (+3180)
_:f64e326af1a24847d75d908c181684ad 79724 (+79724)
_:aea2f35c3dff7d0079035749545c6aec 63339 (+63339)
_:3c74d6eeced389fabe0088ce714b37ef 29047 (+29047)
_:af5e202b11c4a0b6aafdd71db755bd93 25717 (+25717)
_:100a977eb54a13b07456cdc90b506df3 22640 (+22640)
_:d6e0cc2e1de07d48b9db78cf18fb12c3 13996 (+13996)
_:d60265d050254c54454c031c67f6e15c 5288 (+5288)
Other 0 (0)
mgi 0 (-446345)
flybase 0 (-198934)
gwascatalog 0 (-74220)
wormbase 0 (-61452)
omim 0 (-28628)
animalqtldb 0 (-25717)
zfin 0 (-21758)
mmrrc 0 (-13742)
impc 0 (-4815)

Gene Disease Causal Associations By Taxa

Production Query

Dev Query

species count
Total 5001 (-3688)
Homo sapiens 4985 (-3677)
Mus musculus 7 (0)
Hepatitis C virus subtype 2a 2 (+2)
Human gammaherpesvirus 8 2 (-1)
Alphainfluenzavirus 1 (+1)
Bacillus subtilis subsp. subtilis str. JH642 1 (+1)
Escherichia coli 1 (+1)
Listeria innocua 1 (+1)
Salmonella enterica subsp. enterica serovar Typhi 1 (+1)
Other 0 (0)
Human alphaherpesvirus 1 0 (-4)
Paracoccidioides brasiliensis Pb18 0 (-3)
Candida albicans 0 (-2)
Hepacivirus C 0 (-2)
Listeria monocytogenes 0 (-2)
Micrococcus luteus 0 (-2)
Human immunodeficiency virus 1 0 (-1)
Mycobacterium tuberculosis 0 (-1)

Gene Disease Causal Associations By Source

Production Query

Dev Query

species count
Total 5001 (-3688)
_:3c74d6eeced389fabe0088ce714b37ef 4994 (+4994)
clinvar 818 (+3)
_:913675a0c380485a5d76fc807ccec155 7 (+7)
_:37bda355ba8dd72483ee0ec97e9bbda8 6 (+6)
_:d6e0cc2e1de07d48b9db78cf18fb12c3 2 (+2)
_:f64e326af1a24847d75d908c181684ad 2 (+2)
_:d60265d050254c54454c031c67f6e15c 1 (+1)
Other 0 (0)
orphanet 0 (-6119)
omim 0 (-5742)
gwascatalog 0 (-8)
mgislim 0 (-7)
mgi 0 (-6)
mmrrc 0 (-2)
impc 0 (-1)

Gene Disease Non-causal Associations By Taxa

Production Query

Dev Query

species count
Total 25271 (+826)
Homo sapiens 24443 (+839)
Canis lupus familiaris 230 (0)
Bos taurus 120 (0)
Felis catus 62 (0)
Ovis aries 47 (0)
Staphylococcus aureus 46 (0)
Gallus gallus 41 (0)
Equus caballus 39 (0)
Sus scrofa 38 (0)
Hepacivirus C 26 (+21)
Capra hircus 15 (0)
Oryctolagus cuniculus 12 (0)
Escherichia coli 10 (+2)
Coturnix japonica 9 (0)
Equus asinus 5 (0)
Neovison vison 5 (0)
Bubalus bubalis 4 (0)
Mesocricetus auratus 4 (0)
Yellow fever virus 4 (+4)
Bos grunniens 3 (0)
Calidris pugnax 3 (0)
Dengue virus group 3 (+3)
Human immunodeficiency virus 1 3 (-3)
Macaca mulatta 3 (0)
Oryzias latipes 3 (0)
Salmonella enterica subsp. enterica serovar Typhi 3 (+3)
Vulpes lagopus 3 (0)
Acinonyx jubatus 2 (0)
Bacillus subtilis subsp. subtilis str. JH642 2 (+2)
Geospiza fortis 2 (0)
Hepatitis C virus subtype 2a 2 (+2)
Human gammaherpesvirus 8 2 (-1)
Jaagsiekte sheep retrovirus 2 (+2)
Macaca fascicularis 2 (0)
Mammuthus primigenius 2 (0)
Meleagris gallopavo 2 (0)
Mustela putorius furo 2 (0)
Vulpes vulpes 2 (0)
Aepyceros melampus 1 (0)
Alphainfluenzavirus 1 (+1)
Anas platyrhynchos 1 (0)
Anser caerulescens caerulescens 1 (0)
Aspidoscelis inornatus 1 (0)
Astyanax 1 (0)
Bacillus megaterium 1 (+1)
Balaenoptera acutorostrata 1 (0)
Balaenoptera omurai 1 (0)
Bos mutus 1 (0)
Camelus dromedarius 1 (0)
Canis latrans 1 (0)
Canis lupus 1 (0)
Catopuma temminckii 1 (0)
Cavia porcellus 1 (0)
Chaetodipus intermedius 1 (0)
Coereba flaveola 1 (0)
Columba livia 1 (0)
Coturnix coturnix 1 (0)
Ctenopharyngodon idella 1 (0)
Delphinapterus leucas 1 (0)
Delphinus capensis 1 (0)
Dromaius novaehollandiae 1 (0)
Elephas maximus 1 (0)
Falco cherrug 1 (0)
Falco rusticolus 1 (0)
Gorilla gorilla 1 (0)
Holbrookia maculata 1 (0)
Hylobates agilis 1 (0)
Hylobates lar 1 (0)
Lacerta 1 (0)
Leopardus colocolo 1 (0)
Leopardus geoffroyi 1 (0)
Leopardus guigna 1 (0)
Lipotes vexillifer 1 (0)
Macaca fuscata 1 (0)
Megaptera novaeangliae 1 (0)
Monarcha castaneiventris 1 (0)
NCBITaxon:61402 1 (0)
NCBITaxon:9870 1 (+1)
Neophocaena phocaenoides 1 (0)
Numida meleagris 1 (0)
Oreochromis niloticus 1 (0)
Pan troglodytes 1 (0)
Panthera onca 1 (0)
Panthera pardus 1 (0)
Panthera tigris 1 (0)
Panthera tigris tigris 1 (0)
Peromyscus maniculatus 1 (0)
Peromyscus polionotus 1 (0)
Phoenicopterus ruber 1 (0)
Prionailurus bengalensis 1 (0)
Rattus norvegicus 1 (0)
Sapajus apella 1 (+1)
Sciurus carolinensis 1 (0)
Spinus cucullatus 1 (0)
Stercorarius parasiticus 1 (0)
Streptopelia risoria 1 (0)
Sula leucogaster 1 (0)
Sula sula 1 (0)
Sus scrofa domesticus 1 (0)
Symphalangus syndactylus 1 (0)
Takifugu rubripes 1 (0)
Tursiops truncatus 1 (0)
Ursus americanus 1 (0)
Other 0 (0)
Mycobacterium tuberculosis 0 (-11)
Human alphaherpesvirus 1 0 (-8)
Human betaherpesvirus 5 0 (-7)
Listeria monocytogenes 0 (-5)
Candida albicans 0 (-3)
Human gammaherpesvirus 4 0 (-3)
Human herpesvirus 5 strain AD169 0 (-3)
Simian virus 40 0 (-3)
HIV-1 M:B_HXB2R 0 (-2)
Paracoccidioides brasiliensis Pb18 0 (-2)
Pseudomonas aeruginosa 0 (-2)
Cebus apella 0 (-1)
Human papillomavirus type 16 0 (-1)
Rangifer tarandus 0 (-1)

Gene Disease Non-Causal Associations By Source

Production Query

Dev Query

species count
Total 25271 (+826)
_:f64e326af1a24847d75d908c181684ad 20048 (+20048)
_:3c74d6eeced389fabe0088ce714b37ef 4746 (+4746)
_:f2d87dc8e90aed1d4d9c627457494c63 725 (+725)
clinvar 183 (+59)
_:cf322ec174661c7bcb8db5dd85176603 44 (+44)
_:37bda355ba8dd72483ee0ec97e9bbda8 2 (+2)
_:913675a0c380485a5d76fc807ccec155 2 (+2)
udp 2 (0)
Other 0 (0)
gwascatalog 0 (-19535)
omim 0 (-3316)
orphanet 0 (-1257)
omia 0 (-725)
coriell 0 (-41)
mgi 0 (-2)
mgislim 0 (-2)

Gene Homology By Subject Taxa

Production Query

Dev Query

source count
Total 7052357 (-304)
Danio rerio 586404 (-14)
Xenopus tropicalis 519449 (-52)
Mus musculus 487115 (-17)
Rattus norvegicus 480425 (-1)
Equus caballus 467624 (-6)
Sus scrofa 441042 (-17)
Homo sapiens 408527 (-281)
Monodelphis domestica 373581 (-22)
Bos taurus 363603 (-24)
Drosophila melanogaster 362403 (+2)
Canis lupus familiaris 360510 (+1)
Caenorhabditis elegans 350098 (-5)
Gallus gallus 337652 (-10)
Pan troglodytes 281706 (+3)
Anolis carolinensis 274530 (-4)
Macaca mulatta 261933 (-2)
Felis catus 249236 (-9)
Ornithorhynchus anatinus 202167 (-47)
Dictyostelium discoideum 85150 (+2)
Saccharomyces cerevisiae S288C 73458 (+2)
Schizosaccharomyces pombe 972h- 48518 (+3575)
Schizosaccharomyces pombe 19391 (-3574)
Escherichia coli 8823 (+103)
Arabidopsis thaliana 7173 (0)
organism 353 (+1)
Human immunodeficiency virus 1 268 (+96)
Bacillus megaterium 200 (+63)
Staphylococcus aureus 194 (0)
Hepacivirus C 73 (+1)
Pseudomonas aeruginosa PAO1 66 (+66)
Yellow fever virus 62 (+62)
Enterococcus faecalis 57 (+57)
Candida albicans 51 (+22)
Listeria innocua 50 (+33)
Hepatitis C virus subtype 2a 48 (+48)
Salmonella enterica subsp. enterica serovar Typhi 48 (+48)
HIV-1 M:C_ETH2220 46 (+46)
Salmonella 35 (+35)
Acinetobacter baumannii 30 (+30)
Dengue virus group 29 (+29)
Human alphaherpesvirus 1 28 (-84)
Jaagsiekte sheep retrovirus 28 (+14)
Murine rotavirus EDIM 23 (-20)
Bacillus subtilis 22 (-23)
Bacillus subtilis subsp. subtilis str. JH642 21 (+21)
Human gammaherpesvirus 8 18 (0)
Staphylococcus epidermidis 17 (+17)
Staphylococcus saprophyticus 17 (+17)
Hepatitis C virus subtype 1b 16 (+16)
Listeria monocytogenes 13 (-19)
Hepatitis B virus 12 (-12)
Neisseria gonorrhoeae MS11 9 (+9)
Alphainfluenzavirus 5 (-30)
Other 0 (0)
Human betaherpesvirus 5 0 (-97)
Mycobacterium tuberculosis H37Rv 0 (-77)
NCBITaxon:526980 0 (-64)
Micrococcus luteus 0 (-50)
HIV-1 M:B_HXB2R 0 (-37)
Simian virus 40 0 (-21)
Human papillomavirus type 16 0 (-18)
Citrobacter freundii 0 (-17)
Pseudomonas aeruginosa 0 (-16)
Aspergillus nidulans 0 (-15)
Paracoccidioides brasiliensis Pb18 0 (-13)
Human gammaherpesvirus 4 0 (-12)
Human herpesvirus 5 strain AD169 0 (-12)
Mycobacterium tuberculosis 0 (-1)

Gene Interactions By Source

Production Query

Dev Query

source count
Total 4062330 (+150845)
_:89484da57d972b8257c32f8189ae1c67 3073657 (+3073657)
_:bb32f769fcb73ab03c8ecafda0088ff5 1160339 (+1160339)
Other 0 (0)
string 0 (-3073872)
biogrid 0 (-989063)

Gene Interactions By Subject Taxa

Production Query

Dev Query

source count
Total 4062330 (+150845)
Homo sapiens 1580869 (+112269)
Mus musculus 773284 (+38110)
Rattus norvegicus 575193 (0)
Drosophila melanogaster 471048 (+147)
Caenorhabditis elegans 360993 (0)
Danio rerio 292821 (0)
Bacillus megaterium 1312 (+318)
Escherichia coli 1112 (+875)
HIV-1 M:C_ETH2220 903 (+903)
Hepatitis C virus subtype 2a 843 (+843)
Human immunodeficiency virus 1 645 (-335)
Yellow fever virus 520 (+520)
Hepacivirus C 513 (-373)
Salmonella enterica subsp. enterica serovar Typhi 503 (+503)
Dengue virus group 465 (+465)
Human gammaherpesvirus 8 237 (0)
Staphylococcus aureus 215 (0)
Listeria innocua 208 (+180)
Acinetobacter baumannii 103 (+103)
Pseudomonas aeruginosa PAO1 93 (+93)
Human alphaherpesvirus 1 92 (-787)
Neisseria gonorrhoeae MS11 65 (+65)
Hepatitis B virus 61 (-4)
Hepatitis C virus subtype 1b 49 (+49)
Candida albicans 35 (-22)
Murine rotavirus EDIM 31 (-10)
Staphylococcus saprophyticus 26 (+26)
Jaagsiekte sheep retrovirus 15 (+15)
Alphainfluenzavirus 13 (-14)
Bacillus subtilis subsp. subtilis str. JH642 13 (+13)
Listeria monocytogenes 12 (-665)
Salmonella 12 (+12)
Other 12 (-2)
Enterococcus faecalis 8 (+8)
Bacillus subtilis 4 (-88)
Staphylococcus epidermidis 1 (+1)
organism 1 (-22)
Paracoccidioides brasiliensis Pb18 0 (-748)
Simian virus 40 0 (-388)
HIV-1 M:B_HXB2R 0 (-265)
Human gammaherpesvirus 4 0 (-233)
Micrococcus luteus 0 (-208)
Mycobacterium tuberculosis 0 (-205)
Pseudomonas aeruginosa 0 (-123)
Escherichia coli DH1 0 (-39)
Mycobacterium tuberculosis H37Rv 0 (-36)
NCBITaxon:526980 0 (-29)
Candida albicans SC5314 0 (-25)
Human betaherpesvirus 5 0 (-19)
Aspergillus nidulans 0 (-12)
Human herpesvirus 5 strain AD169 0 (-10)
Human papillomavirus type 16 0 (-10)
Citrobacter freundii 0 (-1)

Gene Function By Taxa

Production Query

Dev Query

source count
Total 2298118 (+238722)
Mus musculus 353336 (+1951)
Homo sapiens 322348 (+1381)
Rattus norvegicus 312699 (+1703)
Danio rerio 192739 (+8028)
organism 184686 (+184686)
Gallus gallus 153304 (+4971)
Bos taurus 150879 (-1760)
Sus scrofa 125758 (+5757)
Canis lupus familiaris 113310 (+8567)
Caenorhabditis elegans 106074 (+1686)
Drosophila melanogaster 103094 (+968)
Saccharomyces cerevisiae S288C 70281 (+11)
Dictyostelium discoideum 43333 (+694)
Xenopus tropicalis 34900 (+19558)
Schizosaccharomyces pombe 972h- 19472 (+1279)
Schizosaccharomyces pombe 9666 (-919)
Human immunodeficiency virus 1 475 (+27)
Escherichia coli 317 (+154)
Bacillus megaterium 169 (+58)
Hepatitis C virus subtype 2a 148 (+148)
HIV-1 M:C_ETH2220 136 (+136)
Hepacivirus C 133 (+20)
Human gammaherpesvirus 8 101 (+1)
Dengue virus group 98 (+98)
Salmonella enterica subsp. enterica serovar Typhi 97 (+97)
Jaagsiekte sheep retrovirus 76 (+40)
Neisseria gonorrhoeae MS11 73 (+73)
Yellow fever virus 56 (+56)
Staphylococcus aureus 47 (+3)
Enterococcus faecalis 37 (+37)
Hepatitis B virus 34 (-35)
Bacillus subtilis subsp. subtilis str. JH642 24 (+24)
Pseudomonas aeruginosa PAO1 23 (+23)
Salmonella 23 (+23)
Listeria innocua 21 (+15)
Acinetobacter baumannii 20 (+20)
Human alphaherpesvirus 1 19 (-118)
Alphainfluenzavirus 18 (-7)
Hepatitis C virus subtype 1b 18 (+18)
Staphylococcus saprophyticus 18 (+18)
Bacillus subtilis 15 (-23)
Murine rotavirus EDIM 13 (-11)
Listeria monocytogenes 11 (-79)
Staphylococcus epidermidis 10 (+10)
Candida albicans 9 (-60)
Other 0 (0)
Mycobacterium tuberculosis 0 (-82)
Paracoccidioides brasiliensis Pb18 0 (-78)
HIV-1 M:B_HXB2R 0 (-74)
Vaccinia virus 0 (-73)
Simian virus 40 0 (-49)
Human gammaherpesvirus 4 0 (-47)
Pseudomonas aeruginosa 0 (-38)
Mycobacterium tuberculosis H37Rv 0 (-24)
Human betaherpesvirus 5 0 (-21)
Human herpesvirus 5 strain AD169 0 (-21)
Micrococcus luteus 0 (-21)
NCBITaxon:526980 0 (-21)
Human papillomavirus type 16 0 (-17)
Candida albicans SC5314 0 (-12)
Citrobacter freundii 0 (-10)
Escherichia coli DH1 0 (-9)
Aspergillus nidulans 0 (-8)

Gene Anatomy By Taxa

Production Query

Dev Query

source count
Total 1861006 (+1460)
Mus musculus 546087 (+124)
Homo sapiens 521970 (+1177)
Danio rerio 368702 (-18)
Drosophila melanogaster 197129 (0)
Rattus norvegicus 154372 (0)
Caenorhabditis elegans 71618 (0)
Human immunodeficiency virus 1 200 (+80)
Escherichia coli 173 (+113)
Bacillus megaterium 80 (+40)
Hepacivirus C 80 (0)
Enterococcus faecalis 40 (+40)
HIV-1 M:C_ETH2220 40 (+40)
Hepatitis C virus subtype 2a 40 (+40)
Salmonella enterica subsp. enterica serovar Typhi 40 (+40)
Yellow fever virus 40 (+40)
Acinetobacter baumannii 20 (+20)
Alphainfluenzavirus 20 (0)
Bacillus subtilis 20 (-20)
Bacillus subtilis subsp. subtilis str. JH642 20 (+20)
Candida albicans 20 (-20)
Dengue virus group 20 (+20)
Hepatitis B virus 20 (-20)
Hepatitis C virus subtype 1b 20 (+20)
Human alphaherpesvirus 1 20 (-60)
Human gammaherpesvirus 8 20 (0)
Jaagsiekte sheep retrovirus 20 (+20)
Listeria innocua 20 (0)
Listeria monocytogenes 20 (0)
Murine rotavirus EDIM 20 (-13)
Neisseria gonorrhoeae MS11 20 (+20)
Pseudomonas aeruginosa PAO1 20 (+20)
Salmonella 20 (+20)
Staphylococcus aureus 20 (0)
Staphylococcus saprophyticus 20 (+20)
Staphylococcus epidermidis 15 (+15)
Other 0 (0)
HIV-1 M:B_HXB2R 0 (-40)
Aspergillus nidulans 0 (-20)
Human betaherpesvirus 5 0 (-20)
Human gammaherpesvirus 4 0 (-20)
Human herpesvirus 5 strain AD169 0 (-20)
Human papillomavirus type 16 0 (-20)
Micrococcus luteus 0 (-20)
Mycobacterium tuberculosis 0 (-20)
Mycobacterium tuberculosis H37Rv 0 (-20)
NCBITaxon:526980 0 (-20)
Paracoccidioides brasiliensis Pb18 0 (-20)
Pseudomonas aeruginosa 0 (-20)
Simian virus 40 0 (-20)
Citrobacter freundii 0 (-15)
Candida albicans SC5314 0 (-13)
Escherichia coli DH1 0 (-10)

Genotype Phenotype Associations By Taxa

Production Query

Dev Query

species count
Total 506368 (+9147)
Mus musculus 373533 (+6759)
Danio rerio 122129 (+2184)
organism 9041 (+176)
Mus 1609 (+26)
Mus musculus castaneus 14 (+2)
Mus musculus molossinus 13 (0)
Mus musculus musculus x M. m. domesticus 12 (0)
Mus setulosus 8 (0)
Homo sapiens 3 (0)
Mus musculus musculus 3 (0)
Mus spretus 2 (0)
Mus musculus bactrianus 1 (0)
Other 0 (0)

Genotype Phenotype Associations By Source

Production Query

Dev Query

source count
Total 506368 (+9147)
_:37bda355ba8dd72483ee0ec97e9bbda8 350034 (+350034)
_:100a977eb54a13b07456cdc90b506df3 116792 (+116792)
_:d60265d050254c54454c031c67f6e15c 34185 (+34185)
_:1aff771688d9b6c7d433994cefd59876 5344 (+5344)
_:913675a0c380485a5d76fc807ccec155 10 (+10)
_:cf322ec174661c7bcb8db5dd85176603 3 (+3)
Other 0 (0)
mgi 0 (-345595)
zfin 0 (-114692)
impc 0 (-31661)
go 0 (-5260)
mgislim 0 (-10)
coriell 0 (-3)

Model Disease Associations By Taxa

Production Query

Dev Query

species count
Total 33168 (-302)
Homo sapiens 12170 (+51)
Caenorhabditis elegans 9174 (-754)
Mus musculus 8064 (+95)
Drosophila melanogaster 1514 (+204)
Danio rerio 1148 (+96)
Canis lupus familiaris 685 (+685)
organism 135 (+5)
Bos taurus 115 (+112)
Felis catus 55 (+55)
Equus caballus 34 (+34)
Caprinae 32 (+32)
Mus 20 (+1)
Sus scrofa 10 (+10)
Gallus gallus 3 (0)
Bos 2 (+2)
Mus musculus musculus x M. m. domesticus 2 (0)
Other 2 (0)
Bovinae 1 (+1)
Equus 1 (+1)
Mus musculus castaneus 1 (0)
Carnivora 0 (-685)
Ruminantia 0 (-145)
Felidae 0 (-55)
Equidae 0 (-34)
Suidae 0 (-5)
Sus 0 (-5)
Bovidae 0 (-2)
Viridiplantae 0 (-1)

Model Disease Associations By Source

Production Query

Dev Query

source count
Total 33168 (-302)
_:cf322ec174661c7bcb8db5dd85176603 12173 (+12173)
_:aea2f35c3dff7d0079035749545c6aec 9174 (+9174)
_:37bda355ba8dd72483ee0ec97e9bbda8 8222 (+8222)
_:f006f58a31221b39ef559267933e4f4b 1514 (+1514)
_:100a977eb54a13b07456cdc90b506df3 1150 (+1150)
_:f2d87dc8e90aed1d4d9c627457494c63 935 (+935)
Other 0 (0)
coriell 0 (-12122)
wormbase 0 (-9928)
mgi 0 (-8121)
flybase 0 (-1310)
zfin 0 (-1054)
omia 0 (-935)

Disease Phenotype Associations By Taxa

Production Query

Dev Query

species count
Total 170710 (+9023)
Other 170539 (+9023)
Homo sapiens 171 (0)

Disease Phenotype Associations By Source

Production Query

Dev Query

species count
Total 170710 (+9023)
_:a0e0ed2aa6309eca687972850d482a07 168632 (+168632)
_:3a7ec002fdd89bb6c0c58373c8a65f94 1804 (+1804)
_:f2d87dc8e90aed1d4d9c627457494c63 221 (+221)
Other 0 (0)
hpoa 0 (-159610)
monarch 0 (-1804)
omia 0 (-221)

Variant Genotype Associations By Taxa

Production Query

Dev Query

species count
Total 626016 (+9130)
Mus musculus 540172 (+6195)
Danio rerio 76901 (+2857)
Homo sapiens 4884 (+15)
organism 3527 (+46)
Mus 489 (+17)
Mus setulosus 13 (0)
Mus musculus molossinus 9 (0)
Mus musculus bactrianus 4 (0)
Rattus norvegicus 4 (0)
Mus musculus musculus 3 (0)
Mus spretus 3 (0)
Mus musculus castaneus 2 (0)
Bos taurus 1 (0)
Cricetulus griseus 1 (0)
Macaca mulatta 1 (0)
Plecturocebus moloch 1 (0)
Saguinus labiatus 1 (0)
Other 0 (0)

Variant Genotype Associations By Source

Production Query

Dev Query

source count
Total 626016 (+9130)
_:d6e0cc2e1de07d48b9db78cf18fb12c3 372453 (+372453)
_:37bda355ba8dd72483ee0ec97e9bbda8 173129 (+173129)
_:100a977eb54a13b07456cdc90b506df3 76901 (+76901)
_:d60265d050254c54454c031c67f6e15c 39885 (+39885)
_:cf322ec174661c7bcb8db5dd85176603 4921 (+4921)
udp 112 (0)
Other 0 (0)
mmrrc 0 (-371637)
mgi 0 (-170055)
zfin 0 (-74044)
impc 0 (-36540)
coriell 0 (-4906)

Variant Phenotype Associations By Taxa

Production Query

Dev Query

species count
Total 1028665 (+18325)
Mus musculus 440397 (+5176)
Drosophila melanogaster 149989 (+725)
Homo sapiens 126762 (+6291)
Bos taurus 109095 (+1037)
Caenorhabditis elegans 108238 (+1593)
Danio rerio 60631 (+1420)
Sus scrofa 16585 (+418)
Gallus gallus 8204 (+1361)
Ovis aries 1601 (+10)
Equus caballus 1322 (+309)
Drosophila hydei 663 (0)
organism 643 (-15)
Drosophila subobscura 602 (0)
Drosophila virilis 600 (0)
Drosophila ananassae 422 (0)
Drosophila pseudoobscura pseudoobscura 324 (0)
Drosophila simulans 283 (0)
Drosophila willistoni 260 (0)
Drosophila funebris 229 (0)
Drosophila americana texana 206 (0)
Drosophila robusta 156 (0)
Drosophila busckii 142 (0)
Drosophila immigrans 108 (0)
Drosophila americana americana 100 (0)
Drosophila kikkawai 95 (0)
Drosophila affinis 76 (0)
Drosophila mauritiana 76 (0)
Scaptomyza pallida 71 (0)
Drosophila prosaltans 68 (0)
Drosophila buzzatii 67 (0)
Drosophila miranda 65 (0)
Drosophila paulistorum 60 (0)
Zaprionus indianus 52 (0)
Drosophila littoralis 45 (0)
Drosophila persimilis 39 (0)
Drosophila bifasciata 35 (0)
Drosophila mojavensis 34 (0)
Drosophila ambigua 28 (0)
Saccharomyces cerevisiae S288C 23 (0)
Drosophila transversa 22 (0)
Drosophila auraria 18 (0)
Drosophila biarmipes 18 (0)
Drosophila obscura 14 (0)
Drosophila phalerata 13 (0)
Drosophila bipectinata 11 (0)
Drosophila mercatorum mercatorum 11 (0)
Drosophila tropicalis 10 (0)
Drosophila malerkotliana 9 (0)
Drosophila mediopunctata 9 (0)
Drosophila sechellia 9 (0)
Drosophila takahashii 8 (0)
Drosophila aldrichi 7 (0)
Drosophila novamexicana 7 (0)
Drosophila repleta 7 (0)
Drosophila prostipennis 6 (0)
Drosophila albomicans 5 (0)
Drosophila crucigera 4 (0)
Drosophila elegans 4 (0)
Drosophila eugracilis 4 (0)
Drosophila gaucha 4 (0)
Drosophila pallidosa 4 (0)
Scaptodrosophila rufifrons 4 (0)
Drosophila equinoxialis 3 (0)
Drosophila melanica 3 (0)
Drosophila metzii 3 (0)
Drosophila nigromaculata 3 (0)
Drosophila pachea 3 (0)
Drosophila pseudoobscura bogotana 3 (0)
Chymomyza costata 2 (0)
Drosophila acutilabella 2 (0)
Drosophila arizonae 2 (0)
Drosophila cardini 2 (0)
Drosophila erecta 2 (0)
Drosophila falleni 2 (0)
Drosophila gibberosa 2 (0)
Drosophila madeirensis 2 (0)
Drosophila malerkotliana malerkotliana 2 (0)
Drosophila mimica 2 (0)
Drosophila nasuta 2 (0)
Drosophila nebulosa 2 (0)
Drosophila nigrospiracula 2 (0)
Drosophila similis similis 2 (0)
Drosophila tripunctata 2 (0)
Drosophila yakuba 2 (0)
Scaptodrosophila lebanonensis 2 (0)
Zaprionus sepsoides 2 (0)
Zaprionus tuberculatus 2 (0)
Drosophila ararama 1 (0)
Drosophila guttifera 1 (0)
Drosophila lutescens 1 (0)
Drosophila mulleri 1 (0)
Drosophila tristis 1 (0)
Other 0 (0)

Variant Phenotype Associations By Source

Production Query

Dev Query

source count
Total 1028665 (+18325)
_:37bda355ba8dd72483ee0ec97e9bbda8 418903 (+418903)
_:f006f58a31221b39ef559267933e4f4b 155220 (+155220)
_:af5e202b11c4a0b6aafdd71db755bd93 136807 (+136807)
_:f64e326af1a24847d75d908c181684ad 123051 (+123051)
_:aea2f35c3dff7d0079035749545c6aec 106355 (+106355)
_:100a977eb54a13b07456cdc90b506df3 60633 (+60633)
_:913675a0c380485a5d76fc807ccec155 34152 (+34152)
_:1aff771688d9b6c7d433994cefd59876 22644 (+22644)
_:d60265d050254c54454c031c67f6e15c 20923 (+20923)
udp 3411 (0)
clinvar 189 (+31)
_:a0e0ed2aa6309eca687972850d482a07 108 (+108)
_:7952921eaef2070fa4c9a066f03039b1 23 (+23)
_:cf322ec174661c7bcb8db5dd85176603 3 (+3)
Other 0 (0)
mgi 0 (-413617)
flybase 0 (-154495)
animalqtldb 0 (-133672)
gwascatalog 0 (-116791)
wormbase 0 (-104782)
zfin 0 (-59217)
mgislim 0 (-33889)
go 0 (-22484)
impc 0 (-19129)
hpoa 0 (-108)
sgd 0 (-23)
coriell 0 (-3)

Variant Disease Associations By Taxa

Production Query

Dev Query

species count
Total 170367 (+14380)
Homo sapiens 167473 (+14164)
Drosophila melanogaster 1514 (+204)
Mus musculus 1380 (+12)
Other 0 (0)

Variant Disease Associations By Source

Production Query

Dev Query

source count
Total 170367 (+14380)
clinvar 128834 (+13454)
_:f64e326af1a24847d75d908c181684ad 38093 (+38093)
_:f006f58a31221b39ef559267933e4f4b 1514 (+1514)
_:37bda355ba8dd72483ee0ec97e9bbda8 1380 (+1380)
_:cf322ec174661c7bcb8db5dd85176603 471 (+471)
udp 60 (0)
_:3c74d6eeced389fabe0088ce714b37ef 15 (+15)
_:913675a0c380485a5d76fc807ccec155 3 (+3)
Other 0 (0)
gwascatalog 0 (-37384)
mgi 0 (-1368)
flybase 0 (-1310)
coriell 0 (-469)
omim 0 (-15)
mgislim 0 (-3)
orphanet 0 (-1)

Publication Variant By Source

Production Query

Dev Query

source count
Total 5543551 (+147451)
_:4b0b3aad3e424276db71f12f3d585494 4525766 (+4525766)
_:af5e202b11c4a0b6aafdd71db755bd93 272057 (+272057)
clinvar 197773 (+25804)
_:f006f58a31221b39ef559267933e4f4b 154388 (+154388)
_:f64e326af1a24847d75d908c181684ad 141310 (+141310)
_:37bda355ba8dd72483ee0ec97e9bbda8 92391 (+92391)
_:aea2f35c3dff7d0079035749545c6aec 54929 (+54929)
_:100a977eb54a13b07456cdc90b506df3 46150 (+46150)
_:3c74d6eeced389fabe0088ce714b37ef 44850 (+44850)
_:4799badff40b45442aa379684167c9fe 32118 (+32118)
_:cf322ec174661c7bcb8db5dd85176603 28782 (+28782)
_:1aff771688d9b6c7d433994cefd59876 18979 (+18979)
_:913675a0c380485a5d76fc807ccec155 7779 (+7779)
_:d4375bbf34234dc9c71d4e55cd1f6a97 6286 (+6286)
_:f2d87dc8e90aed1d4d9c627457494c63 5191 (+5191)
_:d6e0cc2e1de07d48b9db78cf18fb12c3 2961 (+2961)
_:bb32f769fcb73ab03c8ecafda0088ff5 733 (+733)
_:7952921eaef2070fa4c9a066f03039b1 29 (+29)
Other 0 (0)
ncbigene 0 (-4417194)
animalqtldb 0 (-271919)
flybase 0 (-153014)
gwascatalog 0 (-134154)
mgi 0 (-91227)
wormbase 0 (-54513)
zfin 0 (-44771)
omim 0 (-44303)
hgnc 0 (-32022)
coriell 0 (-28165)
go 0 (-18791)
mgislim 0 (-7741)
kegg 0 (-6263)
omia 0 (-5191)
mmrrc 0 (-2951)
biogrid 0 (-702)
sgd 0 (-29)

Publication Gene By Source

Production Query

Dev Query

source count
Total 5367980 (+123526)
_:4b0b3aad3e424276db71f12f3d585494 4398176 (+4398176)
_:1aff771688d9b6c7d433994cefd59876 1024301 (+1024301)
_:bb32f769fcb73ab03c8ecafda0088ff5 400172 (+400172)
_:f006f58a31221b39ef559267933e4f4b 98453 (+98453)
_:7952921eaef2070fa4c9a066f03039b1 86732 (+86732)
_:f64e326af1a24847d75d908c181684ad 77828 (+77828)
_:100a977eb54a13b07456cdc90b506df3 73145 (+73145)
_:37bda355ba8dd72483ee0ec97e9bbda8 60755 (+60755)
clinvar 54864 (+2919)
_:aea2f35c3dff7d0079035749545c6aec 38298 (+38298)
_:913675a0c380485a5d76fc807ccec155 32796 (+32796)
_:3c74d6eeced389fabe0088ce714b37ef 29474 (+29474)
_:4799badff40b45442aa379684167c9fe 28101 (+28101)
_:64082e181f6ac24131c4954122dc2897 14030 (+14030)
_:d6e0cc2e1de07d48b9db78cf18fb12c3 9624 (+9624)
_:d60265d050254c54454c031c67f6e15c 7118 (+7118)
_:af5e202b11c4a0b6aafdd71db755bd93 5170 (+5170)
_:31b7c1c49cb9b83dde7d6a0ddc25b476 201 (+201)
_:a0e0ed2aa6309eca687972850d482a07 3 (+3)
Other 0 (0)
ncbigene 0 (-4290508)
go 0 (-1091832)
biogrid 0 (-370632)
flybase 0 (-97572)
sgd 0 (-86732)
gwascatalog 0 (-72806)
zfin 0 (-72460)
mgi 0 (-59967)
wormbase 0 (-37344)
mgislim 0 (-32541)
omim 0 (-29129)
hgnc 0 (-28015)
zfinslim 0 (-13696)
mmrrc 0 (-9379)
impc 0 (-6721)
animalqtldb 0 (-5170)
rgd 0 (-199)
hpoa 0 (-4)

Publication Phenotype By Source

Production Query

Dev Query

source count
Total 5367980 (+123526)
_:4b0b3aad3e424276db71f12f3d585494 4398176 (+4398176)
_:1aff771688d9b6c7d433994cefd59876 1024301 (+1024301)
_:bb32f769fcb73ab03c8ecafda0088ff5 400172 (+400172)
_:f006f58a31221b39ef559267933e4f4b 98453 (+98453)
_:7952921eaef2070fa4c9a066f03039b1 86732 (+86732)
_:f64e326af1a24847d75d908c181684ad 77828 (+77828)
_:100a977eb54a13b07456cdc90b506df3 73145 (+73145)
_:37bda355ba8dd72483ee0ec97e9bbda8 60755 (+60755)
clinvar 54864 (+2919)
_:aea2f35c3dff7d0079035749545c6aec 38298 (+38298)
_:913675a0c380485a5d76fc807ccec155 32796 (+32796)
_:3c74d6eeced389fabe0088ce714b37ef 29474 (+29474)
_:4799badff40b45442aa379684167c9fe 28101 (+28101)
_:64082e181f6ac24131c4954122dc2897 14030 (+14030)
_:d6e0cc2e1de07d48b9db78cf18fb12c3 9624 (+9624)
_:d60265d050254c54454c031c67f6e15c 7118 (+7118)
_:af5e202b11c4a0b6aafdd71db755bd93 5170 (+5170)
_:31b7c1c49cb9b83dde7d6a0ddc25b476 201 (+201)
_:a0e0ed2aa6309eca687972850d482a07 3 (+3)
Other 0 (0)
ncbigene 0 (-4290508)
go 0 (-1091832)
biogrid 0 (-370632)
flybase 0 (-97572)
sgd 0 (-86732)
gwascatalog 0 (-72806)
zfin 0 (-72460)
mgi 0 (-59967)
wormbase 0 (-37344)
mgislim 0 (-32541)
omim 0 (-29129)
hgnc 0 (-28015)
zfinslim 0 (-13696)
mmrrc 0 (-9379)
impc 0 (-6721)
animalqtldb 0 (-5170)
rgd 0 (-199)
hpoa 0 (-4)

Publication Genotype By Source

Production Query

Dev Query

source count
Total 127031 (+2037)
_:37bda355ba8dd72483ee0ec97e9bbda8 81774 (+81774)
_:100a977eb54a13b07456cdc90b506df3 31198 (+31198)
_:cf322ec174661c7bcb8db5dd85176603 9902 (+9902)
_:1aff771688d9b6c7d433994cefd59876 4157 (+4157)
Other 0 (0)
mgi 0 (-80724)
zfin 0 (-30416)
coriell 0 (-9781)
go 0 (-4073)

Publication Disease By Source

Production Query

Dev Query

source count
Total 354245 (+104341)
_:100a977eb54a13b07456cdc90b506df3 100398 (+100398)
_:f7f88d446cfcf7fc5519225b682363c1 91806 (+91806)
clinvar 74976 (+8431)
_:aea2f35c3dff7d0079035749545c6aec 46926 (+46926)
_:1aff771688d9b6c7d433994cefd59876 34860 (+34860)
_:4b0b3aad3e424276db71f12f3d585494 27561 (+27561)
_:37bda355ba8dd72483ee0ec97e9bbda8 13963 (+13963)
_:f2d87dc8e90aed1d4d9c627457494c63 13942 (+13942)
_:f006f58a31221b39ef559267933e4f4b 5291 (+5291)
_:cf322ec174661c7bcb8db5dd85176603 4058 (+4058)
_:bb32f769fcb73ab03c8ecafda0088ff5 3609 (+3609)
_:f64e326af1a24847d75d908c181684ad 2577 (+2577)
_:a0e0ed2aa6309eca687972850d482a07 1680 (+1680)
_:913675a0c380485a5d76fc807ccec155 765 (+765)
_:3a7ec002fdd89bb6c0c58373c8a65f94 184 (+184)
_:d6e0cc2e1de07d48b9db78cf18fb12c3 107 (+107)
_:4799badff40b45442aa379684167c9fe 4 (+4)
Other 0 (0)
zfin 0 (-90889)
wormbase 0 (-53548)
go 0 (-39838)
ncbigene 0 (-31300)
omia 0 (-13942)
mgi 0 (-13825)
flybase 0 (-4256)
biogrid 0 (-4065)
coriell 0 (-4006)
gwascatalog 0 (-2535)
hpoa 0 (-1495)
mgislim 0 (-756)
monarch 0 (-184)
mmrrc 0 (-114)
ctd 0 (-12)
hgnc 0 (-4)

Publication Model By Source

Production Query

Dev Query

source count
Total 60017 (-599)
_:aea2f35c3dff7d0079035749545c6aec 24839 (+24839)
_:1aff771688d9b6c7d433994cefd59876 19055 (+19055)
_:37bda355ba8dd72483ee0ec97e9bbda8 14947 (+14947)
_:4b0b3aad3e424276db71f12f3d585494 13134 (+13134)
_:cf322ec174661c7bcb8db5dd85176603 8985 (+8985)
_:f006f58a31221b39ef559267933e4f4b 5291 (+5291)
_:100a977eb54a13b07456cdc90b506df3 3320 (+3320)
_:f2d87dc8e90aed1d4d9c627457494c63 2635 (+2635)
_:bb32f769fcb73ab03c8ecafda0088ff5 2048 (+2048)
_:913675a0c380485a5d76fc807ccec155 795 (+795)
_:d6e0cc2e1de07d48b9db78cf18fb12c3 97 (+97)
Other 0 (0)
wormbase 0 (-26762)
go 0 (-20494)
mgi 0 (-14772)
ncbigene 0 (-14001)
coriell 0 (-8905)
flybase 0 (-4401)
zfin 0 (-3141)
omia 0 (-2635)
biogrid 0 (-2222)
mgislim 0 (-786)
mmrrc 0 (-97)

Case Model By Source

Production Query

Dev Query

source count
_:cf322ec174661c7bcb8db5dd85176603 30539 (+30539)
Total 30539 (+192)
Other 0 (0)
coriell 0 (-30347)

Case Disease By Source

Production Query

Dev Query

source count
Total 0 (0)
Other 0 (0)

Case Variant By Source

Production Query

Dev Query

source count
udp 112 (0)
Total 112 (0)
Other 0 (0)

Case Genotype By Source

Production Query

Dev Query

source count
_:cf322ec174661c7bcb8db5dd85176603 2961 (+2961)
Total 2961 (+2)
Other 0 (0)
coriell 0 (-2959)

Case Gene By Source

Production Query

Dev Query

source count
_:3c74d6eeced389fabe0088ce714b37ef 2 (+2)
udp 2 (0)
Total 2 (0)
Other 0 (0)
omim 0 (-2)

Case Phenotype By Source

Production Query

Dev Query

source count
udp 1075 (0)
Total 1075 (0)
Other 0 (0)

Gene Pathway By Source

Production Query

Dev Query

source count
_:1655d49f44c04a0a9b704325a9ece910 460208 (+460208)
Total 460208 (+205467)
_:444ca05b60155bb6c7d812edba625a90 94635 (+94635)
Other 0 (0)
reactome 0 (-254741)

Gene Pathway By Taxa

Production Query

Dev Query

source count
Total 460208 (+205467)
organism 184686 (+184686)
Homo sapiens 41502 (+1010)
Xenopus tropicalis 34900 (+19558)
Mus musculus 30073 (-15)
Rattus norvegicus 28102 (-35)
Danio rerio 26005 (-731)
Canis lupus familiaris 25711 (+469)
Sus scrofa 25425 (-478)
Bos taurus 22436 (+77)
Gallus gallus 15812 (+417)
Drosophila melanogaster 12629 (+173)
Caenorhabditis elegans 12600 (+281)
Bacillus megaterium 96 (+17)
Escherichia coli 42 (+23)
Human immunodeficiency virus 1 32 (+9)
HIV-1 M:C_ETH2220 29 (+29)
Hepatitis C virus subtype 2a 22 (+22)
Human gammaherpesvirus 8 19 (+1)
Dengue virus group 17 (+17)
Hepacivirus C 12 (-1)
Salmonella enterica subsp. enterica serovar Typhi 8 (+8)
Staphylococcus aureus 8 (0)
Neisseria gonorrhoeae MS11 7 (+7)
Jaagsiekte sheep retrovirus 5 (+3)
Alphainfluenzavirus 3 (-1)
Bacillus subtilis subsp. subtilis str. JH642 3 (+3)
Listeria innocua 3 (+3)
Salmonella 3 (+3)
Yellow fever virus 3 (+3)
Acinetobacter baumannii 2 (+2)
Enterococcus faecalis 2 (+2)
Human alphaherpesvirus 1 2 (-10)
Murine rotavirus EDIM 2 (-1)
Pseudomonas aeruginosa PAO1 2 (+2)
Bacillus subtilis 1 (-2)
Hepatitis B virus 1 (-2)
Listeria monocytogenes 1 (-1)
Staphylococcus epidermidis 1 (+1)
Staphylococcus saprophyticus 1 (+1)
Other 0 (0)
Paracoccidioides brasiliensis Pb18 0 (-23)
HIV-1 M:B_HXB2R 0 (-15)
Human gammaherpesvirus 4 0 (-8)
Pseudomonas aeruginosa 0 (-8)
Simian virus 40 0 (-6)
Vaccinia virus 0 (-5)
Micrococcus luteus 0 (-3)
Mycobacterium tuberculosis 0 (-3)
Candida albicans 0 (-2)
Candida albicans SC5314 0 (-2)
Escherichia coli DH1 0 (-2)
Human herpesvirus 5 strain AD169 0 (-2)
NCBITaxon:526980 0 (-2)
Citrobacter freundii 0 (-1)
Human betaherpesvirus 5 0 (-1)

Pathway Phenotype By Source

Production Query

Dev Query

source count
_:1655d49f44c04a0a9b704325a9ece910 643875 (+643875)
Total 643875 (-8246)
_:444ca05b60155bb6c7d812edba625a90 610479 (+610479)
_:37bda355ba8dd72483ee0ec97e9bbda8 481427 (+481427)
_:913675a0c380485a5d76fc807ccec155 405246 (+405246)
_:100a977eb54a13b07456cdc90b506df3 149846 (+149846)
_:64082e181f6ac24131c4954122dc2897 95434 (+95434)
_:1aff771688d9b6c7d433994cefd59876 77278 (+77278)
_:d6e0cc2e1de07d48b9db78cf18fb12c3 68238 (+68238)
_:d60265d050254c54454c031c67f6e15c 38864 (+38864)
_:31b7c1c49cb9b83dde7d6a0ddc25b476 1404 (+1404)
_:a0e0ed2aa6309eca687972850d482a07 367 (+367)
Other 0 (0)
reactome 0 (-652121)
mgi 0 (-486336)
mgislim 0 (-404194)
zfin 0 (-152622)
zfinslim 0 (-96593)
go 0 (-78865)
mmrrc 0 (-67628)
impc 0 (-37043)
rgd 0 (-1430)
hpoa 0 (-729)

Relations

Production Query

Dev Query

relation count
Total 33639851 (+1072313)
is_about 8999062 (+212515)
interacts with 3922192 (+115868)
in orthology relationship with 3882790 (-317)
in 1 to 1 orthology relationship with 3169567 (+13)
has phenotype 2795397 (+46855)
Source 2794947 (+167329)
expressed in 1861006 (+1460)
involved_in 1799627 (+416859)
Other 1609593 (+15907)
is part of 522366 (+7472)
enables 455339 (+10200)
is_allele_of 434458 (+2410)
has_affected_feature 387725 (+10413)
contributes to condition 246409 (+11037)
is marker for 136850 (+2788)
colocalizes with 107080 (+34986)
mentions 100534 (+3252)
pathogenic_for_condition 88166 (+9402)
is_reference_allele_of 58919 (-18)
is_expression_variant_of 53175 (+49531)
has role in modeling 44052 (+99)
has_genotype 42242 (+316)
likely_pathogenic_for_condition 40958 (+4103)
genetically interacts with 33058 (-9)
derives_from 30539 (+192)
targets_gene 17695 (-47402)
causes condition 4967 (+333)
contributes to 1083 (+119)
disease has basis in feature 53 (+1)
is_variant_allele_of 2 (0)
is causal germline mutation in 0 (-2243)
is causal loss of function germline mutation of in 0 (-481)
is causal susceptibility factor for 0 (-440)
is causal somatic mutation in 0 (-140)
is causal gain of function germline mutation of in 0 (-69)
is causal germline mutation partially giving rise to 0 (-28)

Direct human gene to phenotype across RO has phenotype

Production Query

Dev Query

species count
Homo sapiens 103 (-78)
Total 103 (-78)
Other 0 (0)

SciGraph Queries

Gene Disease Mix-ups

Production Query

Dev Query

field count
gene 2 (0)

Variant Disease Mix-ups

Production Query

Dev Query

field count
variant 8 (-1)

Gene Variant Mix-ups

Production Query

Dev Query

field count
variant 2388 (0)

Disease Phenotype Mix-ups

Production Query

Dev Query

field count
disease 22 (0)

Genes in more than one taxa (pass inferred)

Production Query

Dev Query

field count
genes 4244 (+72)

Genes in more than one taxa (fail inferred)

Production Query

Dev Query

field count
genes 9756 (+404)

Genes with no taxon

Production Query

Dev Query

field count
genes 351947 (+284)

Features with no taxon

Production Query

Dev Query

field count
features 4591265 (+21050)

Direct human gene to phenotype across RO has phenotype

Production Query

Dev Query

field count
genes 13 (-10)

Genes

Production Query

Dev Query

field count
genes 1954559 (+7386)

Diseases

Production Query

Dev Query

field count
disease 116783 (+988)

Phenotypes

Production Query

Dev Query

field count
phenotype 168347 (+1315)

Variants

Production Query

Dev Query

field count
variants 5733622 (+60936)

Genotypes

Production Query

Dev Query

field count
genotypes 356056 (+8442)

Sequence Features

Production Query

Dev Query

field count
features 7622922 (+66585)

Reagent Targeted Gene

Production Query

Dev Query

field count
rtg 106798 (+1978)

Number of edges connected to owl:Nothing

Production Query

Dev Query

field count
nothing 0 (0)

nodes with subClassOf cycles (depth 2)

Production Query

Dev Query

field count
node_count 1 (0)

nodes with subClassOf cycles (depth 1)

Production Query

Dev Query

field count
node_count 2 (0)