id: clinvar-ingest
version: '2026-06-28'
transform_version: 53c243d5
biolink_version: 4.3.6
build_version: clinvar-ingest_2026-06-28_53c243d5_4.3.6
generated_at: '2026-07-01T02:12:56Z'
sources:
- id: infores:clinvar
  name: ClinVar
  urls:
  - https://ftp.ncbi.nlm.nih.gov/pub/clinvar/vcf_GRCh38/clinvar.vcf.gz
  - https://ftp.ncbi.nlm.nih.gov/pub/clinvar/vcf_GRCh38/clinvar.vcf.gz.tbi
  - https://ftp.ncbi.nlm.nih.gov/pub/clinvar/tab_delimited/submission_summary.txt.gz
  version: '2026-06-28'
  version_method: http_last_modified
  retrieved_at: '2026-07-01T02:12:55Z'
- id: infores:medgen
  name: MedGen
  urls:
  - https://ftp.ncbi.nlm.nih.gov/pub/medgen/MedGenIDMappings.txt.gz
  version: '2026-06-30'
  version_method: http_last_modified
  retrieved_at: '2026-07-01T02:12:55Z'
- id: infores:mondo
  name: Mondo Disease Ontology (SSSOM)
  urls:
  - https://data.monarchinitiative.org/mappings/latest/mondo.sssom.tsv
  version: '2026-06-28'
  version_method: http_last_modified
  retrieved_at: '2026-07-01T02:12:55Z'
artifacts:
- path: clinvar_variant_edges.tsv
  sha256: 91bac39b679d07bc6203f8784d39b0350ff759d279e5697d303f908bbe4d2ad1
- path: clinvar_variant_nodes.tsv
  sha256: 8c852885e1550fc91d2bfb7b9d6ca43ad6188a0c9c7e76c138ad3c6a00e0589b
tools:
  koza: 2.1.1
  biolink_model: 4.3.6
  kghub_downloader: 0.4.5
