dangling_edges:
- categories:
  - biolink:GenotypeToDiseaseAssociation
  missing: 233
  missing_old: 233
  name: alliance_disease_edges
  namespaces:
  - DOID
  - MGI
  - MONDO
  - WB
  node_types:
  - categories:
    - biolink:Genotype
    missing: 20
    name: alliance_genotype_nodes
    namespaces:
    - MGI
    taxon:
    - NCBITaxon:10090
    total_number: 20
  - categories:
    - biolink:Disease
    missing: 70
    name: phenio_nodes
    namespaces:
    - MONDO
    taxon:
    - missing taxon
    total_number: 70
  predicates:
  - missing_object_namespaces:
    - DOID
    - MONDO
    missing_objects: 7
    missing_subject_namespaces:
    - WB
    missing_subjects: 226
    total_number: 520
    uri: biolink:model_of
  total_number: 520
- categories:
  - biolink:GeneToExpressionSiteAssociation
  missing: 163
  missing_old: 163
  name: alliance_gene_to_expression_edges
  namespaces:
  - EMAPA
  - FB
  - GO
  - MGI
  - RGD
  - ZFA
  - ZFIN
  node_types:
  - categories:
    - biolink:Gene
    missing: 197
    name: alliance_gene_nodes
    namespaces:
    - MGI
    taxon:
    - NCBITaxon:10090
    total_number: 197
  - categories:
    - biolink:AnatomicalEntity
    - biolink:CellularComponent
    missing: 297
    name: phenio_nodes
    namespaces:
    - EMAPA
    - GO
    - ZFA
    taxon:
    - missing taxon
    total_number: 297
  predicates:
  - missing_object_namespaces:
    - EMAPA
    missing_objects: 34
    missing_subject_namespaces:
    - FB
    - MGI
    - RGD
    - ZFIN
    missing_subjects: 129
    total_number: 2058
    uri: biolink:expressed_in
  total_number: 2058
- categories:
  - biolink:GenotypeToVariantAssociation
  missing: 4730
  missing_old: 4730
  name: alliance_genotype_edges
  namespaces:
  - MGI
  - RGD
  - ZFIN
  node_types:
  - categories:
    - biolink:Genotype
    missing: 6517
    name: alliance_genotype_nodes
    namespaces:
    - MGI
    - RGD
    - ZFIN
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:7955
    total_number: 6517
  predicates:
  - missing_object_namespaces:
    - MGI
    - RGD
    - ZFIN
    missing_objects: 4730
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 6997
    uri: biolink:has_sequence_variant
  total_number: 6997
- categories:
  - biolink:VariantToPhenotypicFeatureAssociation
  missing: 7470
  missing_old: 7470
  name: alliance_phenotype_edges
  namespaces:
  - WB
  - WBPhenotype
  node_types:
  - categories:
    - biolink:PhenotypicFeature
    missing: 1807
    name: phenio_nodes
    namespaces:
    - WBPhenotype
    taxon:
    - missing taxon
    total_number: 1807
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces:
    - WB
    missing_subjects: 7470
    total_number: 27254
    uri: biolink:has_phenotype
  total_number: 27254
- categories:
  - biolink:GeneToExpressionSiteAssociation
  missing: 54014
  missing_old: 54014
  name: bgee_gene_to_expression_edges
  namespaces:
  - CL
  - ENSEMBL
  - NCBIGene
  - UBERON
  node_types:
  - categories:
    - biolink:AnatomicalEntity
    - biolink:Cell
    missing: 348
    name: phenio_nodes
    namespaces:
    - CL
    - UBERON
    taxon:
    - missing taxon
    total_number: 348
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces:
    - ENSEMBL
    - NCBIGene
    missing_subjects: 54014
    total_number: 307792
    uri: biolink:expressed_in
  total_number: 307792
- categories:
  - biolink:PairwiseGeneToGeneInteraction
  missing: 29518
  missing_old: 29518
  name: biogrid_gene_to_gene_edges
  namespaces:
  - FB
  - HGNC
  - MGI
  - NCBIGene
  - PomBase
  - RGD
  - UniProtKB
  - WB
  - Xenbase
  - ZFIN
  - biogrid
  node_types:
  - categories:
    - biolink:Gene
    missing: 670
    name: alliance_gene_nodes
    namespaces:
    - FB
    - MGI
    - RGD
    - WB
    - Xenbase
    - ZFIN
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:6239
    - NCBITaxon:7227
    - NCBITaxon:7955
    - NCBITaxon:8355
    total_number: 716
  - categories:
    - biolink:Gene
    missing: 7127
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 8181
  - categories:
    - biolink:Gene
    missing: 15
    name: ncbi_gene_9031_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9031
    total_number: 18
  - categories:
    - biolink:Gene
    missing: 3
    name: ncbi_gene_9615_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9615
    total_number: 3
  - categories:
    - biolink:Gene
    missing: 4
    name: ncbi_gene_9823_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9823
    total_number: 5
  - categories:
    - biolink:Gene
    missing: 34
    name: ncbi_gene_9913_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9913
    total_number: 37
  - categories:
    - biolink:Gene
    missing: 1149
    name: pombase_gene_nodes
    namespaces:
    - PomBase
    taxon:
    - NCBITaxon:4896
    total_number: 2119
  predicates:
  - missing_object_namespaces:
    - NCBIGene
    - PomBase
    - UniProtKB
    - biogrid
    missing_objects: 26473
    missing_subject_namespaces:
    - NCBIGene
    - PomBase
    - UniProtKB
    missing_subjects: 19825
    total_number: 1207278
    uri: biolink:interacts_with
  total_number: 1207278
- categories:
  - biolink:VariantToGeneAssociation
  - biolink:VariantToPhenotypicFeatureAssociation
  missing: 46
  missing_old: 46
  name: clinvar_variant_edges
  namespaces:
  - CLINVAR
  - HP
  - NCBIGene
  node_types:
  - categories:
    - biolink:SequenceVariant
    missing: 143
    name: clingen_variant_nodes
    namespaces:
    - CLINVAR
    taxon:
    - NCBITaxon:9606
    total_number: 143
  - categories:
    - biolink:SequenceVariant
    missing: 503
    name: clinvar_variant_nodes
    namespaces:
    - CLINVAR
    taxon:
    - missing taxon
    total_number: 503
  predicates:
  - missing_object_namespaces:
    - HP
    missing_objects: 15
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 59
    uri: biolink:contributes_to
  - missing_object_namespaces:
    - NCBIGene
    missing_objects: 31
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 608
    uri: biolink:is_sequence_variant_of
  total_number: 667
- categories:
  - biolink:ChemicalToDiseaseOrPhenotypicFeatureAssociation
  missing: 4319
  missing_old: 4319
  name: ctd_chemical_to_disease_edges
  namespaces:
  - CHEBI
  - MESH
  - MONDO
  node_types:
  - categories:
    - biolink:ChemicalEntity
    - biolink:Disease
    missing: 3340
    name: phenio_nodes
    namespaces:
    - CHEBI
    - MONDO
    taxon:
    - missing taxon
    total_number: 3340
  predicates:
  - missing_object_namespaces:
    - MESH
    missing_objects: 804
    missing_subject_namespaces:
    - CHEBI
    - MESH
    missing_subjects: 3515
    total_number: 20165
    uri: biolink:treats_or_applied_or_studied_to_treat
  total_number: 20165
- categories:
  - biolink:MacromolecularMachineToBiologicalProcessAssociation
  - biolink:MacromolecularMachineToCellularComponentAssociation
  - biolink:MacromolecularMachineToMolecularActivityAssociation
  missing: 90556
  missing_old: 90556
  name: go_annotation_edges
  namespaces:
  - AspGD
  - ComplexPortal
  - FB
  - GO
  - MGI
  - PomBase
  - RGD
  - RNAcentral
  - SGD
  - UniProtKB
  - WB
  - ZFIN
  node_types:
  - categories:
    - biolink:Gene
    missing: 29
    name: alliance_gene_nodes
    namespaces:
    - FB
    - MGI
    - RGD
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:7227
    total_number: 29
  - categories:
    - biolink:BiologicalProcess
    - biolink:CellularComponent
    - biolink:MolecularActivity
    - biolink:NamedThing
    missing: 16319
    name: phenio_nodes
    namespaces:
    - GO
    taxon:
    - missing taxon
    total_number: 16319
  - categories:
    - biolink:Gene
    missing: 3
    name: pombase_gene_nodes
    namespaces:
    - PomBase
    taxon:
    - NCBITaxon:4896
    total_number: 3
  predicates:
  - missing_object_namespaces:
    - GO
    missing_objects: 8
    missing_subject_namespaces:
    - AspGD
    - ComplexPortal
    - FB
    - MGI
    - PomBase
    - RGD
    - RNAcentral
    - SGD
    - UniProtKB
    - ZFIN
    missing_subjects: 69822
    total_number: 197650
    uri: biolink:actively_involved_in
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces:
    - ComplexPortal
    - RNAcentral
    - UniProtKB
    missing_subjects: 1227
    total_number: 2815
    uri: biolink:acts_upstream_of
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces:
    - RNAcentral
    - UniProtKB
    missing_subjects: 44
    total_number: 53
    uri: biolink:acts_upstream_of_negative_effect
  - missing_object_namespaces:
    - GO
    missing_objects: 1
    missing_subject_namespaces:
    - AspGD
    - ComplexPortal
    - RNAcentral
    - UniProtKB
    - ZFIN
    missing_subjects: 7702
    total_number: 33164
    uri: biolink:acts_upstream_of_or_within
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces:
    - RNAcentral
    - UniProtKB
    missing_subjects: 25
    total_number: 30
    uri: biolink:acts_upstream_of_or_within_negative_effect
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces:
    - UniProtKB
    missing_subjects: 50
    total_number: 74
    uri: biolink:acts_upstream_of_or_within_positive_effect
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces:
    - ComplexPortal
    - UniProtKB
    missing_subjects: 124
    total_number: 150
    uri: biolink:acts_upstream_of_positive_effect
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces:
    - AspGD
    - ComplexPortal
    - RNAcentral
    - UniProtKB
    missing_subjects: 570
    total_number: 807
    uri: biolink:colocalizes_with
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces:
    - AspGD
    - PomBase
    - RGD
    - RNAcentral
    - UniProtKB
    missing_subjects: 574
    total_number: 913
    uri: biolink:contributes_to
  - missing_object_namespaces:
    - GO
    missing_objects: 2
    missing_subject_namespaces:
    - AspGD
    - ComplexPortal
    - FB
    - MGI
    - PomBase
    - RGD
    - RNAcentral
    - SGD
    - UniProtKB
    - WB
    - ZFIN
    missing_subjects: 59068
    total_number: 168485
    uri: biolink:enables
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces:
    - AspGD
    - ComplexPortal
    - FB
    - MGI
    - PomBase
    - RGD
    - RNAcentral
    - UniProtKB
    - ZFIN
    missing_subjects: 15346
    total_number: 19897
    uri: biolink:is_active_in
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces:
    - AspGD
    - ComplexPortal
    - FB
    - MGI
    - RGD
    - RNAcentral
    - SGD
    - UniProtKB
    - ZFIN
    missing_subjects: 47569
    total_number: 165721
    uri: biolink:located_in
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces:
    - AspGD
    - FB
    - MGI
    - PomBase
    - RGD
    - RNAcentral
    - UniProtKB
    missing_subjects: 25229
    total_number: 40884
    uri: biolink:part_of
  total_number: 630643
- categories:
  - biolink:DiseaseOrPhenotypicFeatureToGeneticInheritanceAssociation
  missing: 30
  missing_old: 30
  name: hpoa_disease_mode_of_inheritance_edges
  namespaces:
  - DECIPHER
  - HP
  - MONDO
  - OMIM
  node_types:
  - categories:
    - biolink:PhenotypicFeature
    missing: 6
    name: phenio_nodes
    namespaces:
    - HP
    taxon:
    - missing taxon
    total_number: 6
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces:
    - DECIPHER
    - MONDO
    - OMIM
    missing_subjects: 30
    total_number: 34
    uri: biolink:has_mode_of_inheritance
  total_number: 34
- categories:
  - biolink:DiseaseToPhenotypicFeatureAssociation
  missing: 88
  missing_old: 88
  name: hpoa_disease_to_phenotype_edges
  namespaces:
  - DECIPHER
  - HP
  - MONDO
  - OMIM
  - Orphanet
  node_types:
  - categories:
    - biolink:PhenotypicFeature
    missing: 501
    name: phenio_nodes
    namespaces:
    - HP
    taxon:
    - missing taxon
    total_number: 501
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces:
    - DECIPHER
    - MONDO
    - OMIM
    - Orphanet
    missing_subjects: 88
    total_number: 770
    uri: biolink:has_phenotype
  total_number: 770
- categories:
  - biolink:CausalGeneToDiseaseAssociation
  - biolink:CorrelatedGeneToDiseaseAssociation
  missing: 219
  missing_old: 219
  name: hpoa_gene_to_disease_edges
  namespaces:
  - HGNC
  - MONDO
  - NCBIGene
  - OMIM
  - Orphanet
  node_types:
  - categories:
    - biolink:Gene
    missing: 204
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 204
  - categories:
    - biolink:Disease
    missing: 11
    name: phenio_nodes
    namespaces:
    - MONDO
    taxon:
    - missing taxon
    total_number: 11
  predicates:
  - missing_object_namespaces:
    - MONDO
    - OMIM
    missing_objects: 100
    missing_subject_namespaces:
    - NCBIGene
    missing_subjects: 7
    total_number: 113
    uri: biolink:causes
  - missing_object_namespaces:
    - MONDO
    - OMIM
    missing_objects: 15
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 16
    uri: biolink:contributes_to
  - missing_object_namespaces:
    - MONDO
    - Orphanet
    missing_objects: 100
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 118
    uri: biolink:gene_associated_with_condition
  total_number: 247
- categories:
  - biolink:GeneToPhenotypicFeatureAssociation
  missing: 6
  missing_old: 6
  name: hpoa_gene_to_phenotype_edges
  namespaces:
  - HP
  - NCBIGene
  node_types:
  - categories:
    - biolink:PhenotypicFeature
    missing: 245
    name: phenio_nodes
    namespaces:
    - HP
    taxon:
    - missing taxon
    total_number: 245
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces:
    - NCBIGene
    missing_subjects: 6
    total_number: 289
    uri: biolink:has_phenotype
  total_number: 289
- categories:
  - biolink:GeneToGeneHomologyAssociation
  missing: 33579
  missing_old: 33579
  name: panther_genome_orthologs_edges
  namespaces:
  - ENSEMBL
  - FB
  - HGNC
  - MGI
  - NCBIGene
  - PomBase
  - RGD
  - SGD
  - UniProtKB
  - WB
  - Xenbase
  - ZFIN
  - dictyBase
  node_types:
  - categories:
    - biolink:Gene
    missing: 66489
    name: alliance_gene_nodes
    namespaces:
    - FB
    - MGI
    - RGD
    - SGD
    - WB
    - Xenbase
    - ZFIN
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:559292
    - NCBITaxon:6239
    - NCBITaxon:7227
    - NCBITaxon:7955
    - NCBITaxon:8364
    total_number: 68218
  - categories:
    - biolink:Gene
    missing: 4228
    name: dictybase_gene_nodes
    namespaces:
    - dictyBase
    taxon:
    - NCBITaxon:44689
    total_number: 4228
  - categories:
    - biolink:Gene
    missing: 13897
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 13897
  - categories:
    - biolink:Gene
    missing: 3205
    name: ncbi_gene_227321_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:227321
    total_number: 3249
  - categories:
    - biolink:Gene
    missing: 5373
    name: ncbi_gene_9031_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9031
    total_number: 6627
  - categories:
    - biolink:Gene
    missing: 8030
    name: ncbi_gene_9615_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9615
    total_number: 11214
  - categories:
    - biolink:Gene
    missing: 8441
    name: ncbi_gene_9823_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9823
    total_number: 11516
  - categories:
    - biolink:Gene
    missing: 8936
    name: ncbi_gene_9913_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9913
    total_number: 9134
  - categories:
    - biolink:Gene
    missing: 2555
    name: pombase_gene_nodes
    namespaces:
    - PomBase
    taxon:
    - NCBITaxon:4896
    total_number: 2580
  predicates:
  - missing_object_namespaces:
    - ENSEMBL
    - FB
    - MGI
    - NCBIGene
    - RGD
    - UniProtKB
    - WB
    - Xenbase
    - ZFIN
    missing_objects: 31667
    missing_subject_namespaces:
    - ENSEMBL
    - FB
    - HGNC
    - MGI
    - NCBIGene
    - RGD
    - UniProtKB
    - WB
    - Xenbase
    - ZFIN
    missing_subjects: 31891
    total_number: 670906
    uri: biolink:orthologous_to
  total_number: 670906
- categories:
  - biolink:GeneToPhenotypicFeatureAssociation
  missing: 172
  missing_old: 172
  name: pombase_gene_to_phenotype_edges
  namespaces:
  - FYPO
  - PomBase
  node_types:
  - categories:
    - biolink:PhenotypicFeature
    missing: 286
    name: phenio_nodes
    namespaces:
    - FYPO
    taxon:
    - missing taxon
    total_number: 286
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces:
    - PomBase
    missing_subjects: 172
    total_number: 1778
    uri: biolink:has_phenotype
  total_number: 1778
- categories:
  - biolink:ChemicalToPathwayAssociation
  missing: 189
  missing_old: 189
  name: reactome_chemical_to_pathway_edges
  namespaces:
  - CHEBI
  - Reactome
  node_types:
  - categories:
    - biolink:ChemicalEntity
    missing: 3
    name: phenio_nodes
    namespaces:
    - CHEBI
    taxon:
    - missing taxon
    total_number: 3
  - categories:
    - biolink:Pathway
    missing: 750
    name: reactome_pathway_nodes
    namespaces:
    - Reactome
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:44689
    - NCBITaxon:4896
    - NCBITaxon:4932
    - NCBITaxon:6239
    - NCBITaxon:7227
    - NCBITaxon:7955
    - NCBITaxon:8364
    - NCBITaxon:9031
    - NCBITaxon:9606
    - NCBITaxon:9615
    - NCBITaxon:9823
    - NCBITaxon:9913
    total_number: 750
  predicates:
  - missing_object_namespaces:
    - Reactome
    missing_objects: 1
    missing_subject_namespaces:
    - CHEBI
    missing_subjects: 188
    total_number: 1926
    uri: biolink:participates_in
  total_number: 1926
- categories:
  - biolink:GeneToPathwayAssociation
  missing: 5736
  missing_old: 5736
  name: reactome_gene_to_pathway_edges
  namespaces:
  - NCBIGene
  - Reactome
  node_types:
  - categories:
    - biolink:Pathway
    missing: 2324
    name: reactome_pathway_nodes
    namespaces:
    - Reactome
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:44689
    - NCBITaxon:4896
    - NCBITaxon:4932
    - NCBITaxon:6239
    - NCBITaxon:7227
    - NCBITaxon:7955
    - NCBITaxon:8364
    - NCBITaxon:9031
    - NCBITaxon:9606
    total_number: 2324
  predicates:
  - missing_object_namespaces:
    - Reactome
    missing_objects: 1
    missing_subject_namespaces:
    - NCBIGene
    missing_subjects: 5735
    total_number: 19587
    uri: biolink:participates_in
  total_number: 19587
- categories:
  - biolink:PairwiseGeneToGeneInteraction
  missing: 14189
  missing_old: 14189
  name: string_protein_links_edges
  namespaces:
  - FB
  - HGNC
  - MGI
  - NCBIGene
  - PomBase
  - RGD
  - WB
  - Xenbase
  - ZFIN
  node_types:
  - categories:
    - biolink:Gene
    missing: 3929
    name: alliance_gene_nodes
    namespaces:
    - FB
    - MGI
    - RGD
    - WB
    - Xenbase
    - ZFIN
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:6239
    - NCBITaxon:7227
    - NCBITaxon:7955
    - NCBITaxon:8364
    total_number: 8335
  - categories:
    - biolink:Gene
    missing: 234
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 370
  - categories:
    - biolink:Gene
    missing: 363
    name: ncbi_gene_227321_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:227321
    total_number: 609
  - categories:
    - biolink:Gene
    missing: 642
    name: ncbi_gene_9031_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9031
    total_number: 1373
  - categories:
    - biolink:Gene
    missing: 903
    name: ncbi_gene_9615_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9615
    total_number: 1822
  - categories:
    - biolink:Gene
    missing: 269
    name: ncbi_gene_9913_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9913
    total_number: 493
  - categories:
    - biolink:Gene
    missing: 214
    name: pombase_gene_nodes
    namespaces:
    - PomBase
    taxon:
    - NCBITaxon:4896
    total_number: 2042
  predicates:
  - missing_object_namespaces:
    - NCBIGene
    - PomBase
    missing_objects: 13320
    missing_subject_namespaces:
    - NCBIGene
    - PomBase
    missing_subjects: 13765
    total_number: 238936
    uri: biolink:interacts_with
  total_number: 238936
- categories:
  - biolink:GeneToPhenotypicFeatureAssociation
  missing: 62
  missing_old: 62
  name: xenbase_gene_to_phenotype_edges
  namespaces:
  - XPO
  - Xenbase
  node_types:
  - categories:
    - biolink:PhenotypicFeature
    missing: 147
    name: phenio_nodes
    namespaces:
    - XPO
    taxon:
    - missing taxon
    total_number: 147
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces:
    - Xenbase
    missing_subjects: 62
    total_number: 274
    uri: biolink:has_phenotype
  total_number: 274
- categories:
  - biolink:GeneToGeneHomologyAssociation
  missing: 16061
  missing_old: 16061
  name: xenbase_non_entrez_orthologs_edges
  namespaces:
  - HGNC
  - MGI
  - OMIM
  - Xenbase
  - ZFIN
  node_types:
  - categories:
    - biolink:Gene
    missing: 26684
    name: alliance_gene_nodes
    namespaces:
    - MGI
    - ZFIN
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:7955
    total_number: 26684
  - categories:
    - biolink:Gene
    missing: 12600
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 12600
  predicates:
  - missing_object_namespaces:
    - MGI
    - OMIM
    - ZFIN
    missing_objects: 705
    missing_subject_namespaces:
    - Xenbase
    missing_subjects: 15356
    total_number: 45148
    uri: biolink:orthologous_to
  total_number: 45148
- categories:
  - biolink:GeneToGeneHomologyAssociation
  missing: 11717
  missing_old: 11717
  name: xenbase_orthologs_edges
  namespaces:
  - HGNC
  - MGI
  - NCBIGene
  - RGD
  - Xenbase
  - ZFIN
  node_types:
  - categories:
    - biolink:Gene
    missing: 14687
    name: alliance_gene_nodes
    namespaces:
    - MGI
    - RGD
    - Xenbase
    - ZFIN
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:7955
    - NCBITaxon:8355
    - NCBITaxon:8364
    total_number: 14687
  - categories:
    - biolink:Gene
    missing: 7716
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 7716
  predicates:
  - missing_object_namespaces:
    - NCBIGene
    missing_objects: 576
    missing_subject_namespaces:
    - Xenbase
    missing_subjects: 11141
    total_number: 30688
    uri: biolink:orthologous_to
  total_number: 30688
- categories:
  - biolink:GenotypeToPhenotypicFeatureAssociation
  missing: 468
  missing_old: 468
  name: zfin_genotype_to_phenotype_edges
  namespaces:
  - ZFIN
  - ZP
  node_types:
  - categories:
    - biolink:PhenotypicFeature
    missing: 680
    name: phenio_nodes
    namespaces:
    - ZP
    taxon:
    - missing taxon
    total_number: 680
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces:
    - ZFIN
    missing_subjects: 468
    total_number: 1667
    uri: biolink:has_phenotype
  total_number: 1667
- categories:
  - biolink:GeneToGeneHomologyAssociation
  missing: 6
  missing_old: 6
  name: zfin_orthology_edges
  namespaces:
  - FB
  - HGNC
  - MGI
  - ZFIN
  node_types:
  - categories:
    - biolink:Gene
    missing: 5
    name: alliance_gene_nodes
    namespaces:
    - MGI
    - ZFIN
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:7955
    total_number: 5
  - categories:
    - biolink:Gene
    missing: 2
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 2
  predicates:
  - missing_object_namespaces:
    - FB
    - MGI
    missing_objects: 4
    missing_subject_namespaces:
    - ZFIN
    missing_subjects: 2
    total_number: 14
    uri: biolink:orthologous_to
  total_number: 14
duplicate_edges:
- categories:
  - biolink:GeneToExpressionSiteAssociation
  missing: 10254
  missing_old: 10254
  name: bgee_gene_to_expression_edges
  namespaces:
  - CL
  - HGNC
  - NCBIGene
  - UBERON
  node_types:
  - categories:
    - biolink:Gene
    missing: 2
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 2
  - categories:
    - biolink:Gene
    missing: 4881
    name: ncbi_gene_9031_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9031
    total_number: 4881
  - categories:
    - biolink:Gene
    missing: 48
    name: ncbi_gene_9823_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9823
    total_number: 48
  - categories:
    - biolink:Gene
    missing: 929
    name: ncbi_gene_9913_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9913
    total_number: 929
  - categories:
    - biolink:AnatomicalEntity
    - biolink:Cell
    missing: 150
    name: phenio_nodes
    namespaces:
    - CL
    - UBERON
    taxon:
    - missing taxon
    total_number: 150
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces:
    - NCBIGene
    missing_subjects: 10254
    total_number: 113050
    uri: biolink:expressed_in
  total_number: 113050
- categories:
  - biolink:PairwiseGeneToGeneInteraction
  missing: 0
  missing_old: 0
  name: biogrid_gene_to_gene_edges
  namespaces:
  - RGD
  node_types:
  - categories:
    - biolink:Gene
    missing: 8
    name: alliance_gene_nodes
    namespaces:
    - RGD
    taxon:
    - NCBITaxon:10116
    total_number: 11
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 14
    uri: biolink:interacts_with
  total_number: 14
- categories:
  - biolink:ChemicalToDiseaseOrPhenotypicFeatureAssociation
  missing: 15
  missing_old: 15
  name: ctd_chemical_to_disease_edges
  namespaces:
  - CHEBI
  - MESH
  - MONDO
  node_types:
  - categories:
    - biolink:ChemicalEntity
    - biolink:Disease
    missing: 52
    name: phenio_nodes
    namespaces:
    - CHEBI
    - MONDO
    taxon:
    - missing taxon
    total_number: 52
  predicates:
  - missing_object_namespaces:
    - MESH
    missing_objects: 15
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 100
    uri: biolink:treats_or_applied_or_studied_to_treat
  total_number: 100
- categories:
  - biolink:MacromolecularMachineToBiologicalProcessAssociation
  - biolink:MacromolecularMachineToCellularComponentAssociation
  - biolink:MacromolecularMachineToMolecularActivityAssociation
  missing: 0
  missing_old: 0
  name: go_annotation_edges
  namespaces:
  - GO
  - HGNC
  - NCBIGene
  - RGD
  node_types:
  - categories:
    - biolink:Gene
    missing: 20
    name: alliance_gene_nodes
    namespaces:
    - RGD
    taxon:
    - NCBITaxon:10116
    total_number: 20
  - categories:
    - biolink:Gene
    missing: 180
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 180
  - categories:
    - biolink:Gene
    missing: 15
    name: ncbi_gene_9031_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9031
    total_number: 15
  - categories:
    - biolink:Gene
    missing: 45
    name: ncbi_gene_9615_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9615
    total_number: 45
  - categories:
    - biolink:Gene
    missing: 42
    name: ncbi_gene_9823_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9823
    total_number: 42
  - categories:
    - biolink:Gene
    missing: 58
    name: ncbi_gene_9913_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9913
    total_number: 58
  - categories:
    - biolink:BiologicalProcess
    - biolink:CellularComponent
    - biolink:MolecularActivity
    missing: 416
    name: phenio_nodes
    namespaces:
    - GO
    taxon:
    - missing taxon
    total_number: 416
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 1412
    uri: biolink:actively_involved_in
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 51
    uri: biolink:acts_upstream_of_or_within
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 12
    uri: biolink:acts_upstream_of_positive_effect
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 2
    uri: biolink:colocalizes_with
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 6
    uri: biolink:contributes_to
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 5447
    uri: biolink:enables
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 160
    uri: biolink:is_active_in
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 5018
    uri: biolink:located_in
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 732
    uri: biolink:part_of
  total_number: 12840
- categories:
  - biolink:DiseaseOrPhenotypicFeatureToGeneticInheritanceAssociation
  missing: 0
  missing_old: 0
  name: hpoa_disease_mode_of_inheritance_edges
  namespaces:
  - HGNC
  - HP
  - MONDO
  node_types:
  - categories:
    - biolink:Gene
    missing: 1
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 1
  - categories:
    - biolink:Disease
    - biolink:PhenotypicFeature
    missing: 2
    name: phenio_nodes
    namespaces:
    - HP
    - MONDO
    taxon:
    - missing taxon
    total_number: 2
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 2
    uri: biolink:has_mode_of_inheritance
  total_number: 2
- categories:
  - biolink:DiseaseToPhenotypicFeatureAssociation
  missing: 0
  missing_old: 0
  name: hpoa_disease_to_phenotype_edges
  namespaces:
  - HGNC
  - HP
  - MONDO
  node_types:
  - categories:
    - biolink:Gene
    missing: 1
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 1
  - categories:
    - biolink:Disease
    - biolink:PhenotypicFeature
    missing: 2
    name: phenio_nodes
    namespaces:
    - HP
    - MONDO
    taxon:
    - missing taxon
    total_number: 2
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 2
    uri: biolink:has_phenotype
  total_number: 2
- categories:
  - biolink:GeneToGeneHomologyAssociation
  missing: 19333
  missing_old: 19333
  name: panther_genome_orthologs_edges
  namespaces:
  - ENSEMBL
  - FB
  - HGNC
  - MGI
  - NCBIGene
  - PomBase
  - RGD
  - SGD
  - UniProtKB
  - WB
  - Xenbase
  - ZFIN
  - dictyBase
  node_types:
  - categories:
    - biolink:Gene
    missing: 39383
    name: alliance_gene_nodes
    namespaces:
    - FB
    - MGI
    - RGD
    - SGD
    - WB
    - Xenbase
    - ZFIN
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:559292
    - NCBITaxon:6239
    - NCBITaxon:7227
    - NCBITaxon:7955
    - NCBITaxon:8364
    total_number: 39876
  - categories:
    - biolink:Gene
    missing: 3039
    name: dictybase_gene_nodes
    namespaces:
    - dictyBase
    taxon:
    - NCBITaxon:44689
    total_number: 3039
  - categories:
    - biolink:Gene
    missing: 7195
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 7195
  - categories:
    - biolink:Gene
    missing: 2283
    name: ncbi_gene_227321_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:227321
    total_number: 2283
  - categories:
    - biolink:Gene
    missing: 576
    name: ncbi_gene_9031_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9031
    total_number: 6084
  - categories:
    - biolink:Gene
    missing: 5515
    name: ncbi_gene_9615_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9615
    total_number: 6277
  - categories:
    - biolink:Gene
    missing: 5857
    name: ncbi_gene_9823_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9823
    total_number: 6299
  - categories:
    - biolink:Gene
    missing: 4875
    name: ncbi_gene_9913_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9913
    total_number: 5772
  - categories:
    - biolink:Gene
    missing: 1849
    name: pombase_gene_nodes
    namespaces:
    - PomBase
    taxon:
    - NCBITaxon:4896
    total_number: 1849
  predicates:
  - missing_object_namespaces:
    - ENSEMBL
    - FB
    - NCBIGene
    - UniProtKB
    - Xenbase
    - ZFIN
    missing_objects: 14941
    missing_subject_namespaces:
    - ENSEMBL
    - HGNC
    - MGI
    - NCBIGene
    - RGD
    - UniProtKB
    missing_subjects: 15807
    total_number: 316184
    uri: biolink:orthologous_to
  total_number: 316184
- categories:
  - biolink:GeneToPathwayAssociation
  missing: 0
  missing_old: 0
  name: reactome_gene_to_pathway_edges
  namespaces:
  - RGD
  - Reactome
  - ZFIN
  node_types:
  - categories:
    - biolink:Gene
    missing: 10
    name: alliance_gene_nodes
    namespaces:
    - RGD
    - ZFIN
    taxon:
    - NCBITaxon:10116
    - NCBITaxon:7955
    total_number: 10
  - categories:
    - biolink:Pathway
    missing: 11
    name: reactome_pathway_nodes
    namespaces:
    - Reactome
    taxon:
    - NCBITaxon:10116
    - NCBITaxon:7955
    total_number: 11
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 22
    uri: biolink:participates_in
  total_number: 22
- categories:
  - biolink:PairwiseGeneToGeneInteraction
  missing: 1
  missing_old: 1
  name: string_protein_links_edges
  namespaces:
  - NCBIGene
  - RGD
  - ZFIN
  node_types:
  - categories:
    - biolink:Gene
    missing: 65
    name: alliance_gene_nodes
    namespaces:
    - RGD
    - ZFIN
    taxon:
    - NCBITaxon:10116
    - NCBITaxon:7955
    total_number: 109
  predicates:
  - missing_object_namespaces:
    - NCBIGene
    missing_objects: 1
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 260
    uri: biolink:interacts_with
  total_number: 260
duplicate_nodes:
- categories:
  - biolink:SequenceVariant
  name: alliance_allele_nodes
  namespaces:
  - MGI
  taxon:
  - NCBITaxon:10090
  total_number: 365
- categories:
  - biolink:SequenceVariant
  name: clingen_variant_nodes
  namespaces:
  - CLINVAR
  taxon:
  - NCBITaxon:9606
  total_number: 3803
- categories:
  - biolink:SequenceVariant
  name: clinvar_variant_nodes
  namespaces:
  - CLINVAR
  taxon:
  - null
  total_number: 3803
edges:
- categories:
  - biolink:VariantToGeneAssociation
  missing: 0
  missing_old: 0
  name: alliance_allele_edges
  namespaces:
  - MGI
  - RGD
  - ZFIN
  node_types:
  - categories:
    - biolink:SequenceVariant
    missing: 160704
    name: alliance_allele_nodes
    namespaces:
    - MGI
    - RGD
    - ZFIN
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:7955
    total_number: 160704
  - categories:
    - biolink:Gene
    missing: 41257
    name: alliance_gene_nodes
    namespaces:
    - MGI
    - RGD
    - ZFIN
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:7955
    total_number: 41257
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 160920
    uri: biolink:is_sequence_variant_of
  total_number: 160920
- categories:
  - biolink:GenotypeToDiseaseAssociation
  missing: 0
  missing_old: 0
  name: alliance_disease_edges
  namespaces:
  - MGI
  - MONDO
  - RGD
  - ZFIN
  node_types:
  - categories:
    - biolink:Genotype
    missing: 8535
    name: alliance_genotype_nodes
    namespaces:
    - MGI
    - RGD
    - ZFIN
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:7955
    total_number: 8535
  - categories:
    - biolink:Disease
    missing: 2075
    name: phenio_nodes
    namespaces:
    - MONDO
    taxon:
    - missing taxon
    total_number: 2075
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 10056
    uri: biolink:model_of
  total_number: 10056
- categories:
  - biolink:GeneToExpressionSiteAssociation
  missing: 0
  missing_old: 0
  name: alliance_gene_to_expression_edges
  namespaces:
  - EMAPA
  - FB
  - FBbt
  - GO
  - MGI
  - RGD
  - SGD
  - WB
  - WBbt
  - ZFA
  - ZFIN
  node_types:
  - categories:
    - biolink:Gene
    missing: 54480
    name: alliance_gene_nodes
    namespaces:
    - FB
    - MGI
    - RGD
    - SGD
    - WB
    - ZFIN
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:559292
    - NCBITaxon:6239
    - NCBITaxon:7227
    - NCBITaxon:7955
    total_number: 54480
  - categories:
    - biolink:AnatomicalEntity
    - biolink:CellularComponent
    missing: 13707
    name: phenio_nodes
    namespaces:
    - EMAPA
    - FBbt
    - GO
    - WBbt
    - ZFA
    taxon:
    - missing taxon
    total_number: 13707
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 1919316
    uri: biolink:expressed_in
  total_number: 1919316
- categories:
  - biolink:GenotypeToGeneAssociation
  - biolink:GenotypeToVariantAssociation
  missing: 0
  missing_old: 0
  name: alliance_genotype_edges
  namespaces:
  - MGI
  - RGD
  - ZFIN
  node_types:
  - categories:
    - biolink:SequenceVariant
    missing: 64291
    name: alliance_allele_nodes
    namespaces:
    - MGI
    - RGD
    - ZFIN
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:7955
    total_number: 64291
  - categories:
    - biolink:Gene
    missing: 24158
    name: alliance_gene_nodes
    namespaces:
    - MGI
    - RGD
    - ZFIN
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:7955
    total_number: 24158
  - categories:
    - biolink:Genotype
    missing: 118169
    name: alliance_genotype_nodes
    namespaces:
    - MGI
    - RGD
    - ZFIN
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:7955
    total_number: 118169
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 156553
    uri: biolink:has_sequence_variant
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 111646
    uri: biolink:related_to
  total_number: 268199
- categories:
  - biolink:GeneToPhenotypicFeatureAssociation
  - biolink:GenotypeToPhenotypicFeatureAssociation
  - biolink:VariantToPhenotypicFeatureAssociation
  missing: 0
  missing_old: 0
  name: alliance_phenotype_edges
  namespaces:
  - MGI
  - MP
  - RGD
  - WB
  - WBPhenotype
  node_types:
  - categories:
    - biolink:SequenceVariant
    missing: 40199
    name: alliance_allele_nodes
    namespaces:
    - MGI
    - RGD
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    total_number: 40199
  - categories:
    - biolink:Gene
    missing: 20819
    name: alliance_gene_nodes
    namespaces:
    - MGI
    - RGD
    - WB
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:6239
    total_number: 20819
  - categories:
    - biolink:Genotype
    missing: 75451
    name: alliance_genotype_nodes
    namespaces:
    - MGI
    - RGD
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    total_number: 75451
  - categories:
    - biolink:PhenotypicFeature
    missing: 13109
    name: phenio_nodes
    namespaces:
    - MP
    - WBPhenotype
    taxon:
    - missing taxon
    total_number: 13109
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 1026420
    uri: biolink:has_phenotype
  total_number: 1026420
- categories:
  - biolink:GeneToExpressionSiteAssociation
  missing: 0
  missing_old: 0
  name: bgee_gene_to_expression_edges
  namespaces:
  - CL
  - HGNC
  - NCBIGene
  - UBERON
  node_types:
  - categories:
    - biolink:Gene
    missing: 32179
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 32179
  - categories:
    - biolink:Gene
    missing: 6364
    name: ncbi_gene_9031_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9031
    total_number: 6364
  - categories:
    - biolink:Gene
    missing: 14151
    name: ncbi_gene_9823_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9823
    total_number: 14151
  - categories:
    - biolink:Gene
    missing: 13998
    name: ncbi_gene_9913_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9913
    total_number: 13998
  - categories:
    - biolink:AnatomicalEntity
    - biolink:Cell
    missing: 376
    name: phenio_nodes
    namespaces:
    - CL
    - UBERON
    taxon:
    - missing taxon
    total_number: 376
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 460838
    uri: biolink:expressed_in
  total_number: 460838
- categories:
  - biolink:PairwiseGeneToGeneInteraction
  missing: 0
  missing_old: 0
  name: biogrid_gene_to_gene_edges
  namespaces:
  - FB
  - HGNC
  - MGI
  - NCBIGene
  - PomBase
  - RGD
  - WB
  - Xenbase
  - ZFIN
  node_types:
  - categories:
    - biolink:Gene
    missing: 17613
    name: alliance_gene_nodes
    namespaces:
    - FB
    - MGI
    - RGD
    - WB
    - Xenbase
    - ZFIN
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:6239
    - NCBITaxon:7227
    - NCBITaxon:7955
    - NCBITaxon:8355
    total_number: 34829
  - categories:
    - biolink:Gene
    missing: 4075
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 19808
  - categories:
    - biolink:Gene
    missing: 56
    name: ncbi_gene_227321_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:227321
    total_number: 64
  - categories:
    - biolink:Gene
    missing: 282
    name: ncbi_gene_9031_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9031
    total_number: 356
  - categories:
    - biolink:Gene
    missing: 120
    name: ncbi_gene_9615_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9615
    total_number: 129
  - categories:
    - biolink:Gene
    missing: 62
    name: ncbi_gene_9823_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9823
    total_number: 75
  - categories:
    - biolink:Gene
    missing: 248
    name: ncbi_gene_9913_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9913
    total_number: 312
  - categories:
    - biolink:Gene
    missing: 1087
    name: pombase_gene_nodes
    namespaces:
    - PomBase
    taxon:
    - NCBITaxon:4896
    total_number: 2093
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 1355954
    uri: biolink:interacts_with
  total_number: 1355954
- categories:
  - biolink:VariantToDiseaseAssociation
  - biolink:VariantToGeneAssociation
  missing: 0
  missing_old: 0
  name: clingen_variant_edges
  namespaces:
  - CAID
  - CLINVAR
  - HGNC
  - MONDO
  node_types:
  - categories:
    - biolink:SequenceVariant
    missing: 8362
    name: clingen_variant_nodes
    namespaces:
    - CAID
    - CLINVAR
    taxon:
    - NCBITaxon:9606
    total_number: 8362
  - categories:
    - biolink:Gene
    missing: 146
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 146
  - categories:
    - biolink:Disease
    missing: 111
    name: phenio_nodes
    namespaces:
    - MONDO
    taxon:
    - missing taxon
    total_number: 111
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 2174
    uri: biolink:associated_with_increased_likelihood_of
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 2655
    uri: biolink:causes
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 3535
    uri: biolink:genetically_associated_with
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 8208
    uri: biolink:is_sequence_variant_of
  total_number: 16572
- categories:
  - biolink:VariantToDiseaseAssociation
  - biolink:VariantToGeneAssociation
  - biolink:VariantToPhenotypicFeatureAssociation
  missing: 0
  missing_old: 0
  name: clinvar_variant_edges
  namespaces:
  - CLINVAR
  - HGNC
  - HP
  - MONDO
  node_types:
  - categories:
    - biolink:SequenceVariant
    missing: 3803
    name: clingen_variant_nodes
    namespaces:
    - CLINVAR
    taxon:
    - NCBITaxon:9606
    total_number: 3803
  - categories:
    - biolink:SequenceVariant
    missing: 7349
    name: clinvar_variant_nodes
    namespaces:
    - CLINVAR
    taxon:
    - missing taxon
    total_number: 7349
  - categories:
    - biolink:Gene
    missing: 165
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 165
  - categories:
    - biolink:Disease
    - biolink:PhenotypicFeature
    missing: 112
    name: phenio_nodes
    namespaces:
    - HP
    - MONDO
    taxon:
    - missing taxon
    total_number: 112
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 2298
    uri: biolink:associated_with_increased_likelihood_of
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 8854
    uri: biolink:causes
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 159
    uri: biolink:contributes_to
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 11398
    uri: biolink:is_sequence_variant_of
  total_number: 22709
- categories:
  - biolink:ChemicalToDiseaseOrPhenotypicFeatureAssociation
  missing: 0
  missing_old: 0
  name: ctd_chemical_to_disease_edges
  namespaces:
  - CHEBI
  - MONDO
  node_types:
  - categories:
    - biolink:ChemicalEntity
    - biolink:Disease
    missing: 4727
    name: phenio_nodes
    namespaces:
    - CHEBI
    - MONDO
    taxon:
    - missing taxon
    total_number: 4727
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 18934
    uri: biolink:treats_or_applied_or_studied_to_treat
  total_number: 18934
- categories:
  - biolink:GeneToPhenotypicFeatureAssociation
  missing: 0
  missing_old: 0
  name: dictybase_gene_to_phenotype_edges
  namespaces:
  - DDPHENO
  - dictyBase
  node_types:
  - categories:
    - biolink:Gene
    missing: 507
    name: dictybase_gene_nodes
    namespaces:
    - dictyBase
    taxon:
    - NCBITaxon:44689
    total_number: 507
  - categories:
    - biolink:PhenotypicFeature
    missing: 170
    name: phenio_nodes
    namespaces:
    - DDPHENO
    taxon:
    - missing taxon
    total_number: 170
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 1216
    uri: biolink:has_phenotype
  total_number: 1216
- categories:
  - biolink:MacromolecularMachineToBiologicalProcessAssociation
  - biolink:MacromolecularMachineToCellularComponentAssociation
  - biolink:MacromolecularMachineToMolecularActivityAssociation
  missing: 0
  missing_old: 0
  name: go_annotation_edges
  namespaces:
  - FB
  - GO
  - HGNC
  - MGI
  - NCBIGene
  - PomBase
  - RGD
  - SGD
  - WB
  - ZFIN
  - dictyBase
  node_types:
  - categories:
    - biolink:Gene
    missing: 112240
    name: alliance_gene_nodes
    namespaces:
    - FB
    - MGI
    - RGD
    - SGD
    - WB
    - ZFIN
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:559292
    - NCBITaxon:6239
    - NCBITaxon:7227
    - NCBITaxon:7955
    total_number: 112240
  - categories:
    - biolink:Gene
    missing: 9171
    name: dictybase_gene_nodes
    namespaces:
    - dictyBase
    taxon:
    - NCBITaxon:44689
    total_number: 9171
  - categories:
    - biolink:Gene
    missing: 19486
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 19486
  - categories:
    - biolink:Gene
    missing: 8358
    name: ncbi_gene_9031_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9031
    total_number: 8358
  - categories:
    - biolink:Gene
    missing: 11151
    name: ncbi_gene_9615_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9615
    total_number: 11151
  - categories:
    - biolink:Gene
    missing: 10589
    name: ncbi_gene_9823_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9823
    total_number: 10589
  - categories:
    - biolink:Gene
    missing: 13126
    name: ncbi_gene_9913_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9913
    total_number: 13126
  - categories:
    - biolink:BiologicalProcess
    - biolink:CellularComponent
    - biolink:MolecularActivity
    missing: 23663
    name: phenio_nodes
    namespaces:
    - GO
    taxon:
    - missing taxon
    total_number: 23663
  - categories:
    - biolink:Gene
    missing: 5059
    name: pombase_gene_nodes
    namespaces:
    - PomBase
    taxon:
    - NCBITaxon:4896
    total_number: 5059
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 1086407
    uri: biolink:actively_involved_in
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 12079
    uri: biolink:acts_upstream_of
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 291
    uri: biolink:acts_upstream_of_negative_effect
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 281988
    uri: biolink:acts_upstream_of_or_within
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 253
    uri: biolink:acts_upstream_of_or_within_negative_effect
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 796
    uri: biolink:acts_upstream_of_or_within_positive_effect
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 897
    uri: biolink:acts_upstream_of_positive_effect
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 4629
    uri: biolink:colocalizes_with
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 8897
    uri: biolink:contributes_to
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 1249859
    uri: biolink:enables
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 176113
    uri: biolink:is_active_in
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 987277
    uri: biolink:located_in
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 136322
    uri: biolink:part_of
  total_number: 3945808
- categories:
  - biolink:DiseaseOrPhenotypicFeatureToGeneticInheritanceAssociation
  missing: 0
  missing_old: 0
  name: hpoa_disease_mode_of_inheritance_edges
  namespaces:
  - HGNC
  - HP
  - MONDO
  node_types:
  - categories:
    - biolink:Gene
    missing: 6
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 6
  - categories:
    - biolink:Disease
    - biolink:PhenotypicFeature
    missing: 8228
    name: phenio_nodes
    namespaces:
    - HP
    - MONDO
    taxon:
    - missing taxon
    total_number: 8228
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 8822
    uri: biolink:has_mode_of_inheritance
  total_number: 8822
- categories:
  - biolink:DiseaseToPhenotypicFeatureAssociation
  missing: 0
  missing_old: 0
  name: hpoa_disease_to_phenotype_edges
  namespaces:
  - HGNC
  - HP
  - MONDO
  node_types:
  - categories:
    - biolink:Gene
    missing: 7
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 7
  - categories:
    - biolink:Disease
    - biolink:PhenotypicFeature
    missing: 21808
    name: phenio_nodes
    namespaces:
    - HP
    - MONDO
    taxon:
    - missing taxon
    total_number: 21808
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 254860
    uri: biolink:has_phenotype
  total_number: 254860
- categories:
  - biolink:CausalGeneToDiseaseAssociation
  - biolink:CorrelatedGeneToDiseaseAssociation
  missing: 0
  missing_old: 0
  name: hpoa_gene_to_disease_edges
  namespaces:
  - HGNC
  - MONDO
  node_types:
  - categories:
    - biolink:Gene
    missing: 5469
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 5469
  - categories:
    - biolink:Disease
    missing: 8339
    name: phenio_nodes
    namespaces:
    - MONDO
    taxon:
    - missing taxon
    total_number: 8339
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 8916
    uri: biolink:causes
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 580
    uri: biolink:contributes_to
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 8098
    uri: biolink:gene_associated_with_condition
  total_number: 17594
- categories:
  - biolink:GeneToPhenotypicFeatureAssociation
  missing: 0
  missing_old: 0
  name: hpoa_gene_to_phenotype_edges
  namespaces:
  - HGNC
  - HP
  node_types:
  - categories:
    - biolink:Gene
    missing: 4745
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 4745
  - categories:
    - biolink:PhenotypicFeature
    missing: 8612
    name: phenio_nodes
    namespaces:
    - HP
    taxon:
    - missing taxon
    total_number: 8612
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 217621
    uri: biolink:has_phenotype
  total_number: 217621
- categories:
  - biolink:ChemicalOrDrugOrTreatmentToDiseaseOrPhenotypicFeatureAssociation
  missing: 0
  missing_old: 0
  name: maxo_annotation_edges
  namespaces:
  - HP
  - MAXO
  - MONDO
  node_types:
  - categories:
    - biolink:Disease
    - biolink:NamedThing
    - biolink:PhenotypicFeature
    missing: 565
    name: phenio_nodes
    namespaces:
    - HP
    - MAXO
    - MONDO
    taxon:
    - missing taxon
    total_number: 565
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 786
    uri: biolink:ameliorates_condition
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 3
    uri: biolink:contraindicated_in
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 145
    uri: biolink:preventative_for_condition
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 17
    uri: biolink:related_to
  total_number: 951
- categories:
  - biolink:GeneToGeneHomologyAssociation
  missing: 0
  missing_old: 0
  name: panther_genome_orthologs_edges
  namespaces:
  - FB
  - HGNC
  - MGI
  - NCBIGene
  - PomBase
  - RGD
  - SGD
  - WB
  - Xenbase
  - ZFIN
  - dictyBase
  node_types:
  - categories:
    - biolink:Gene
    missing: 14049
    name: alliance_gene_nodes
    namespaces:
    - FB
    - MGI
    - RGD
    - SGD
    - WB
    - Xenbase
    - ZFIN
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:559292
    - NCBITaxon:6239
    - NCBITaxon:7227
    - NCBITaxon:7955
    - NCBITaxon:8364
    total_number: 95224
  - categories:
    - biolink:Gene
    missing: 6027
    name: dictybase_gene_nodes
    namespaces:
    - dictyBase
    taxon:
    - NCBITaxon:44689
    total_number: 6027
  - categories:
    - biolink:Gene
    missing: 19156
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 19156
  - categories:
    - biolink:Gene
    missing: 1569
    name: ncbi_gene_227321_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:227321
    total_number: 6011
  - categories:
    - biolink:Gene
    missing: 559
    name: ncbi_gene_9031_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9031
    total_number: 8636
  - categories:
    - biolink:Gene
    missing: 1012
    name: ncbi_gene_9615_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9615
    total_number: 15821
  - categories:
    - biolink:Gene
    missing: 544
    name: ncbi_gene_9823_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9823
    total_number: 16475
  - categories:
    - biolink:Gene
    missing: 274
    name: ncbi_gene_9913_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9913
    total_number: 13686
  - categories:
    - biolink:Gene
    missing: 1302
    name: pombase_gene_nodes
    namespaces:
    - PomBase
    taxon:
    - NCBITaxon:4896
    total_number: 4225
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 1336705
    uri: biolink:orthologous_to
  total_number: 1336705
- categories:
  - biolink:Association
  - biolink:DiseaseOrPhenotypicFeatureToLocationAssociation
  - biolink:DiseaseToPhenotypicFeatureAssociation
  missing: 0
  missing_old: 0
  name: phenio_edges
  namespaces:
  - APO
  - BFO
  - BSPO
  - CHEBI
  - CHR
  - CL
  - CLM
  - DDANAT
  - DDPHENO
  - EMAPA
  - FBbt
  - FBcv
  - FBdv
  - FYPO
  - GO
  - HP
  - HSAPDV
  - MAXO
  - MGPO
  - MONDO
  - MP
  - MPATH
  - NBO
  - NCBITaxon
  - OBA
  - PATO
  - PHIPO
  - PLANP
  - PR
  - RO
  - SO
  - UBERON
  - UPHENO
  - WBLS
  - WBPhenotype
  - WBbt
  - XAO
  - XPO
  - ZFA
  - ZFS
  - ZP
  node_types:
  - categories:
    - biolink:AnatomicalEntity
    - biolink:BiologicalProcess
    - biolink:Cell
    - biolink:CellularComponent
    - biolink:ChemicalEntity
    - biolink:Disease
    - biolink:LifeStage
    - biolink:MolecularActivity
    - biolink:MolecularEntity
    - biolink:NamedThing
    - biolink:OrganismTaxon
    - biolink:PhenotypicFeature
    - biolink:Protein
    missing: 175112
    name: phenio_nodes
    namespaces:
    - APO
    - BFO
    - BSPO
    - CHEBI
    - CHR
    - CL
    - CLM
    - DDANAT
    - DDPHENO
    - EMAPA
    - FBbt
    - FBcv
    - FBdv
    - FYPO
    - GO
    - HP
    - HSAPDV
    - MAXO
    - MGPO
    - MONDO
    - MP
    - MPATH
    - NBO
    - NCBITaxon
    - OBA
    - PATO
    - PHIPO
    - PLANP
    - PR
    - RO
    - SO
    - UBERON
    - UPHENO
    - WBLS
    - WBPhenotype
    - WBbt
    - XAO
    - XPO
    - ZFA
    - ZFS
    - ZP
    taxon:
    - missing taxon
    total_number: 347585
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 5
    uri: biolink:caused_by
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 2
    uri: biolink:causes
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 1020
    uri: biolink:disease_has_location
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 89
    uri: biolink:disrupts
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 269
    uri: biolink:has_participant
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 1109
    uri: biolink:has_phenotype
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 407453
    uri: biolink:related_to
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 616728
    uri: biolink:subclass_of
  total_number: 1026675
- categories:
  - biolink:GeneToPhenotypicFeatureAssociation
  missing: 0
  missing_old: 0
  name: pombase_gene_to_phenotype_edges
  namespaces:
  - FYPO
  - PomBase
  node_types:
  - categories:
    - biolink:PhenotypicFeature
    missing: 6392
    name: phenio_nodes
    namespaces:
    - FYPO
    taxon:
    - missing taxon
    total_number: 6392
  - categories:
    - biolink:Gene
    missing: 5037
    name: pombase_gene_nodes
    namespaces:
    - PomBase
    taxon:
    - NCBITaxon:4896
    total_number: 5037
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 176767
    uri: biolink:has_phenotype
  total_number: 176767
- categories:
  - biolink:ChemicalToPathwayAssociation
  missing: 0
  missing_old: 0
  name: reactome_chemical_to_pathway_edges
  namespaces:
  - CHEBI
  - Reactome
  node_types:
  - categories:
    - biolink:ChemicalEntity
    missing: 2852
    name: phenio_nodes
    namespaces:
    - CHEBI
    taxon:
    - missing taxon
    total_number: 2852
  - categories:
    - biolink:Pathway
    missing: 14130
    name: reactome_pathway_nodes
    namespaces:
    - Reactome
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:44689
    - NCBITaxon:4896
    - NCBITaxon:4932
    - NCBITaxon:6239
    - NCBITaxon:7227
    - NCBITaxon:7955
    - NCBITaxon:8364
    - NCBITaxon:9031
    - NCBITaxon:9606
    - NCBITaxon:9615
    - NCBITaxon:9823
    - NCBITaxon:9913
    total_number: 14130
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 105360
    uri: biolink:participates_in
  total_number: 105360
- categories:
  - biolink:GeneToPathwayAssociation
  missing: 0
  missing_old: 0
  name: reactome_gene_to_pathway_edges
  namespaces:
  - FB
  - HGNC
  - MGI
  - NCBIGene
  - PomBase
  - RGD
  - Reactome
  - WB
  - Xenbase
  - ZFIN
  node_types:
  - categories:
    - biolink:Gene
    missing: 33217
    name: alliance_gene_nodes
    namespaces:
    - FB
    - MGI
    - RGD
    - WB
    - Xenbase
    - ZFIN
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:6239
    - NCBITaxon:7227
    - NCBITaxon:7955
    - NCBITaxon:8364
    total_number: 33217
  - categories:
    - biolink:Gene
    missing: 11197
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 11197
  - categories:
    - biolink:Gene
    missing: 2471
    name: ncbi_gene_9031_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9031
    total_number: 2471
  - categories:
    - biolink:Gene
    missing: 4802
    name: ncbi_gene_9615_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9615
    total_number: 4802
  - categories:
    - biolink:Gene
    missing: 4542
    name: ncbi_gene_9823_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9823
    total_number: 4542
  - categories:
    - biolink:Gene
    missing: 5505
    name: ncbi_gene_9913_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9913
    total_number: 5505
  - categories:
    - biolink:Gene
    missing: 607
    name: pombase_gene_nodes
    namespaces:
    - PomBase
    taxon:
    - NCBITaxon:4896
    total_number: 607
  - categories:
    - biolink:Pathway
    missing: 15045
    name: reactome_pathway_nodes
    namespaces:
    - Reactome
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:4896
    - NCBITaxon:6239
    - NCBITaxon:7227
    - NCBITaxon:7955
    - NCBITaxon:8364
    - NCBITaxon:9031
    - NCBITaxon:9606
    - NCBITaxon:9615
    - NCBITaxon:9823
    - NCBITaxon:9913
    total_number: 15045
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 223820
    uri: biolink:participates_in
  total_number: 223820
- categories:
  - biolink:PairwiseGeneToGeneInteraction
  missing: 0
  missing_old: 0
  name: string_protein_links_edges
  namespaces:
  - FB
  - HGNC
  - MGI
  - NCBIGene
  - PomBase
  - RGD
  - WB
  - Xenbase
  - ZFIN
  node_types:
  - categories:
    - biolink:Gene
    missing: 7627
    name: alliance_gene_nodes
    namespaces:
    - FB
    - MGI
    - RGD
    - WB
    - Xenbase
    - ZFIN
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:6239
    - NCBITaxon:7227
    - NCBITaxon:7955
    - NCBITaxon:8364
    total_number: 71419
  - categories:
    - biolink:Gene
    missing: 1236
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 15374
  - categories:
    - biolink:Gene
    missing: 513
    name: ncbi_gene_227321_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:227321
    total_number: 4224
  - categories:
    - biolink:Gene
    missing: 999
    name: ncbi_gene_9031_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9031
    total_number: 11333
  - categories:
    - biolink:Gene
    missing: 1270
    name: ncbi_gene_9615_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9615
    total_number: 11935
  - categories:
    - biolink:Gene
    missing: 1371
    name: ncbi_gene_9913_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9913
    total_number: 13925
  - categories:
    - biolink:Gene
    missing: 221
    name: pombase_gene_nodes
    namespaces:
    - PomBase
    taxon:
    - NCBITaxon:4896
    total_number: 2026
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 1441056
    uri: biolink:interacts_with
  total_number: 1441056
- categories:
  - biolink:GeneToPhenotypicFeatureAssociation
  missing: 0
  missing_old: 0
  name: xenbase_gene_to_phenotype_edges
  namespaces:
  - XPO
  - Xenbase
  node_types:
  - categories:
    - biolink:Gene
    missing: 516
    name: alliance_gene_nodes
    namespaces:
    - Xenbase
    taxon:
    - NCBITaxon:8355
    - NCBITaxon:8364
    total_number: 516
  - categories:
    - biolink:PhenotypicFeature
    missing: 483
    name: phenio_nodes
    namespaces:
    - XPO
    taxon:
    - missing taxon
    total_number: 483
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 2318
    uri: biolink:has_phenotype
  total_number: 2318
- categories:
  - biolink:GeneToGeneHomologyAssociation
  missing: 0
  missing_old: 0
  name: xenbase_orthologs_edges
  namespaces:
  - HGNC
  - MGI
  - RGD
  - Xenbase
  - ZFIN
  node_types:
  - categories:
    - biolink:Gene
    missing: 64830
    name: alliance_gene_nodes
    namespaces:
    - MGI
    - RGD
    - Xenbase
    - ZFIN
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:10116
    - NCBITaxon:7955
    - NCBITaxon:8355
    - NCBITaxon:8364
    total_number: 64830
  - categories:
    - biolink:Gene
    missing: 14672
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 14672
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 107408
    uri: biolink:orthologous_to
  total_number: 107408
- categories:
  - biolink:GeneToPhenotypicFeatureAssociation
  missing: 0
  missing_old: 0
  name: zfin_gene_to_phenotype_edges
  namespaces:
  - ZFIN
  - ZP
  node_types:
  - categories:
    - biolink:Gene
    missing: 7775
    name: alliance_gene_nodes
    namespaces:
    - ZFIN
    taxon:
    - NCBITaxon:7955
    total_number: 7775
  - categories:
    - biolink:PhenotypicFeature
    missing: 27342
    name: phenio_nodes
    namespaces:
    - ZP
    taxon:
    - missing taxon
    total_number: 27342
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 160033
    uri: biolink:has_phenotype
  total_number: 160033
- categories:
  - biolink:GenotypeToPhenotypicFeatureAssociation
  missing: 0
  missing_old: 0
  name: zfin_genotype_to_phenotype_edges
  namespaces:
  - ZFIN
  - ZP
  node_types:
  - categories:
    - biolink:Genotype
    missing: 28665
    name: alliance_genotype_nodes
    namespaces:
    - ZFIN
    taxon:
    - NCBITaxon:7955
    total_number: 28665
  - categories:
    - biolink:PhenotypicFeature
    missing: 30623
    name: phenio_nodes
    namespaces:
    - ZP
    taxon:
    - missing taxon
    total_number: 30623
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 136996
    uri: biolink:has_phenotype
  total_number: 136996
- categories:
  - biolink:GeneToGeneHomologyAssociation
  missing: 0
  missing_old: 0
  name: zfin_orthology_edges
  namespaces:
  - FB
  - HGNC
  - MGI
  - ZFIN
  node_types:
  - categories:
    - biolink:Gene
    missing: 28998
    name: alliance_gene_nodes
    namespaces:
    - FB
    - MGI
    - ZFIN
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:7227
    - NCBITaxon:7955
    total_number: 28998
  - categories:
    - biolink:Gene
    missing: 13619
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 13619
  predicates:
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 62196
    uri: biolink:orthologous_to
  total_number: 62196
nodes:
- categories:
  - biolink:SequenceVariant
  name: alliance_allele_nodes
  namespaces:
  - MGI
  - RGD
  - ZFIN
  taxon:
  - NCBITaxon:10090
  - NCBITaxon:10116
  - NCBITaxon:7955
  total_number: 193474
- categories:
  - biolink:Gene
  name: alliance_gene_nodes
  namespaces:
  - FB
  - MGI
  - RGD
  - SGD
  - WB
  - Xenbase
  - ZFIN
  taxon:
  - NCBITaxon:10090
  - NCBITaxon:10116
  - NCBITaxon:559292
  - NCBITaxon:6239
  - NCBITaxon:7227
  - NCBITaxon:7955
  - NCBITaxon:8355
  - NCBITaxon:8364
  total_number: 321672
- categories:
  - biolink:Genotype
  name: alliance_genotype_nodes
  namespaces:
  - MGI
  - RGD
  - ZFIN
  taxon:
  - NCBITaxon:10090
  - NCBITaxon:10116
  - NCBITaxon:7955
  total_number: 137206
- categories:
  - biolink:SequenceVariant
  name: clingen_variant_nodes
  namespaces:
  - CAID
  - CLINVAR
  taxon:
  - NCBITaxon:9606
  total_number: 8362
- categories:
  - biolink:SequenceVariant
  name: clinvar_variant_nodes
  namespaces:
  - CLINVAR
  taxon:
  - missing taxon
  total_number: 7349
- categories:
  - biolink:Gene
  name: dictybase_gene_nodes
  namespaces:
  - dictyBase
  taxon:
  - NCBITaxon:44689
  total_number: 14222
- categories:
  - biolink:Gene
  name: hgnc_gene_nodes
  namespaces:
  - HGNC
  taxon:
  - NCBITaxon:9606
  total_number: 44454
- categories:
  - biolink:Gene
  name: ncbi_gene_227321_nodes
  namespaces:
  - NCBIGene
  taxon:
  - NCBITaxon:227321
  total_number: 10569
- categories:
  - biolink:Gene
  name: ncbi_gene_9031_nodes
  namespaces:
  - NCBIGene
  taxon:
  - NCBITaxon:9031
  total_number: 32180
- categories:
  - biolink:Gene
  name: ncbi_gene_9615_nodes
  namespaces:
  - NCBIGene
  taxon:
  - NCBITaxon:9615
  total_number: 50756
- categories:
  - biolink:Gene
  name: ncbi_gene_9823_nodes
  namespaces:
  - NCBIGene
  taxon:
  - NCBITaxon:9823
  total_number: 45437
- categories:
  - biolink:Gene
  name: ncbi_gene_9913_nodes
  namespaces:
  - NCBIGene
  taxon:
  - NCBITaxon:9913
  total_number: 57279
- categories:
  - biolink:AnatomicalEntity
  - biolink:BiologicalProcess
  - biolink:Cell
  - biolink:CellularComponent
  - biolink:ChemicalEntity
  - biolink:Disease
  - biolink:LifeStage
  - biolink:MolecularActivity
  - biolink:MolecularEntity
  - biolink:NamedThing
  - biolink:OrganismTaxon
  - biolink:PhenotypicFeature
  - biolink:Protein
  name: phenio_nodes
  namespaces:
  - APO
  - BFO
  - BSPO
  - CHEBI
  - CHR
  - CL
  - CLM
  - CP
  - DCTERMS
  - DDANAT
  - DDPHENO
  - EMAPA
  - FBbt
  - FBcv
  - FBdv
  - FYPO
  - GO
  - GO/EXTENSIONS/RO
  - GOREL
  - HP
  - HSAPDV
  - IAO
  - MAXO
  - MGPO
  - MONDO
  - MP
  - MPATH
  - NBO
  - NCBITaxon
  - OBA
  - OBO
  - OMO
  - PATO
  - PHIPO
  - PLANP
  - PR
  - RO
  - SO
  - UBERON
  - UBPROP
  - UPHENO
  - WBLS
  - WBPhenotype
  - WBbt
  - XAO
  - XPO
  - ZFA
  - ZFS
  - ZP
  - owl
  - skos
  taxon:
  - missing taxon
  total_number: 394450
- categories:
  - biolink:Gene
  name: pombase_gene_nodes
  namespaces:
  - PomBase
  taxon:
  - NCBITaxon:4896
  total_number: 5134
- categories:
  - biolink:Pathway
  name: reactome_pathway_nodes
  namespaces:
  - Reactome
  taxon:
  - NCBITaxon:10090
  - NCBITaxon:10116
  - NCBITaxon:44689
  - NCBITaxon:4896
  - NCBITaxon:4932
  - NCBITaxon:6239
  - NCBITaxon:7227
  - NCBITaxon:7955
  - NCBITaxon:8364
  - NCBITaxon:9031
  - NCBITaxon:9606
  - NCBITaxon:9615
  - NCBITaxon:9823
  - NCBITaxon:9913
  total_number: 22254
