dangling_edges:
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  - WB
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    name: phenio_nodes
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    missing_subject_namespaces:
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    total_number: 507
    uri: biolink:model_of
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  missing_old: 170
  name: alliance_gene_to_expression_edges
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  - FB
  - GO
  - MGI
  - RGD
  - SGD
  - ZFA
  - ZFIN
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    - SGD
    taxon:
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    total_number: 217
  - categories:
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    - biolink:CellularComponent
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    namespaces:
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    - GO
    - ZFA
    taxon:
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    - MGI
    - RGD
    - ZFIN
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    total_number: 2129
    uri: biolink:expressed_in
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  name: alliance_genotype_edges
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  - RGD
  - ZFIN
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    name: alliance_genotype_nodes
    namespaces:
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    - RGD
    - ZFIN
    taxon:
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    - NCBITaxon:7955
    total_number: 6521
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    - RGD
    - ZFIN
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    missing_subject_namespaces: []
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    total_number: 7002
    uri: biolink:has_sequence_variant
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  missing_old: 7470
  name: alliance_phenotype_edges
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    name: phenio_nodes
    namespaces:
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    missing_subject_namespaces:
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    total_number: 27254
    uri: biolink:has_phenotype
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  name: bgee_gene_to_expression_edges
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  - ENSEMBL
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  - UBERON
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    - biolink:Cell
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    name: phenio_nodes
    namespaces:
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    - UBERON
    taxon:
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    missing_subject_namespaces:
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    total_number: 308011
    uri: biolink:expressed_in
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  missing_old: 29527
  name: biogrid_gene_to_gene_edges
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  - HGNC
  - MGI
  - NCBIGene
  - PomBase
  - RGD
  - UniProtKB
  - WB
  - Xenbase
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    missing: 789
    name: alliance_gene_nodes
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    - RGD
    - WB
    - Xenbase
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    - NCBITaxon:7227
    - NCBITaxon:7955
    - NCBITaxon:8355
    total_number: 849
  - categories:
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    name: hgnc_gene_nodes
    namespaces:
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    taxon:
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    total_number: 8182
  - categories:
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    missing: 15
    name: ncbi_gene_9031_nodes
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    taxon:
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    total_number: 18
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    name: ncbi_gene_9615_nodes
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    taxon:
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    total_number: 3
  - categories:
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    name: ncbi_gene_9823_nodes
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    taxon:
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  - categories:
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    name: ncbi_gene_9913_nodes
    namespaces:
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    taxon:
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  - categories:
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    name: pombase_gene_nodes
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    taxon:
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    - PomBase
    - UniProtKB
    - Xenbase
    - biogrid
    missing_objects: 26481
    missing_subject_namespaces:
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    - PomBase
    - UniProtKB
    - Xenbase
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    total_number: 1207477
    uri: biolink:interacts_with
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  - biolink:VariantToPhenotypicFeatureAssociation
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  name: clinvar_variant_edges
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  - HP
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    missing: 141
    name: clingen_variant_nodes
    namespaces:
    - CLINVAR
    taxon:
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    total_number: 141
  - categories:
    - biolink:SequenceVariant
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    name: clinvar_variant_nodes
    namespaces:
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    taxon:
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    total_number: 503
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    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 59
    uri: biolink:contributes_to
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    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 606
    uri: biolink:is_sequence_variant_of
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- categories:
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  missing_old: 4314
  name: ctd_chemical_to_disease_edges
  namespaces:
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  - MESH
  - MONDO
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    - biolink:Disease
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    name: phenio_nodes
    namespaces:
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    taxon:
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    total_number: 3340
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    missing_subject_namespaces:
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    - MESH
    missing_subjects: 3510
    total_number: 20146
    uri: biolink:treats_or_applied_or_studied_to_treat
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- categories:
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  - biolink:MacromolecularMachineToCellularComponentAssociation
  - biolink:MacromolecularMachineToMolecularActivityAssociation
  missing: 89569
  missing_old: 89569
  name: go_annotation_edges
  namespaces:
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  - ComplexPortal
  - FB
  - GO
  - HGNC
  - MGI
  - NCBIGene
  - PR
  - PomBase
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  - RNAcentral
  - RefSeq
  - SGD
  - UniProtKB
  - WB
  - ZFIN
  node_types:
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    name: alliance_gene_nodes
    namespaces:
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    - SGD
    - ZFIN
    taxon:
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    - NCBITaxon:559292
    - NCBITaxon:7955
    total_number: 49
  - categories:
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    missing: 19
    name: hgnc_gene_nodes
    namespaces:
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    taxon:
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    total_number: 19
  - categories:
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    name: ncbi_gene_9823_nodes
    namespaces:
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    taxon:
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    total_number: 2
  - categories:
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    missing: 8
    name: ncbi_gene_9913_nodes
    namespaces:
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    taxon:
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    total_number: 8
  - categories:
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    - biolink:CellularComponent
    - biolink:MolecularActivity
    - biolink:NamedThing
    missing: 16291
    name: phenio_nodes
    namespaces:
    - GO
    taxon:
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    total_number: 16291
  - categories:
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    missing: 2
    name: pombase_gene_nodes
    namespaces:
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    taxon:
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    total_number: 2
  predicates:
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    missing_subject_namespaces:
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    - ComplexPortal
    - FB
    - MGI
    - PomBase
    - RGD
    - RNAcentral
    - SGD
    - UniProtKB
    - ZFIN
    missing_subjects: 68764
    total_number: 195094
    uri: biolink:actively_involved_in
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces:
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    - MGI
    - RNAcentral
    - UniProtKB
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    total_number: 2817
    uri: biolink:acts_upstream_of
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    missing_objects: 0
    missing_subject_namespaces:
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    - UniProtKB
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    total_number: 53
    uri: biolink:acts_upstream_of_negative_effect
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    missing_subject_namespaces:
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    - MGI
    - RGD
    - RNAcentral
    - RefSeq
    - SGD
    - UniProtKB
    - WB
    missing_subjects: 7727
    total_number: 33223
    uri: biolink:acts_upstream_of_or_within
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces:
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    - UniProtKB
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    total_number: 30
    uri: biolink:acts_upstream_of_or_within_negative_effect
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces:
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    missing_subjects: 50
    total_number: 74
    uri: biolink:acts_upstream_of_or_within_positive_effect
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    missing_objects: 0
    missing_subject_namespaces:
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    missing_subjects: 124
    total_number: 150
    uri: biolink:acts_upstream_of_positive_effect
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces:
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    - ComplexPortal
    - RNAcentral
    - UniProtKB
    missing_subjects: 569
    total_number: 806
    uri: biolink:colocalizes_with
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    missing_objects: 0
    missing_subject_namespaces:
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    - PomBase
    - RGD
    - RNAcentral
    - UniProtKB
    missing_subjects: 575
    total_number: 914
    uri: biolink:contributes_to
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    missing_subject_namespaces:
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    - ComplexPortal
    - FB
    - MGI
    - PR
    - PomBase
    - RGD
    - RNAcentral
    - RefSeq
    - SGD
    - UniProtKB
    - WB
    - ZFIN
    missing_subjects: 58188
    total_number: 166613
    uri: biolink:enables
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    missing_objects: 0
    missing_subject_namespaces:
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    - ComplexPortal
    - FB
    - MGI
    - PR
    - PomBase
    - RGD
    - RNAcentral
    - SGD
    - UniProtKB
    - ZFIN
    missing_subjects: 15454
    total_number: 20060
    uri: biolink:is_active_in
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    missing_objects: 0
    missing_subject_namespaces:
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    - ComplexPortal
    - MGI
    - PR
    - RGD
    - RNAcentral
    - SGD
    - UniProtKB
    - ZFIN
    missing_subjects: 46922
    total_number: 164910
    uri: biolink:located_in
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    missing_subject_namespaces:
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    - FB
    - MGI
    - PomBase
    - RGD
    - RNAcentral
    - RefSeq
    - UniProtKB
    missing_subjects: 25153
    total_number: 40813
    uri: biolink:part_of
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  missing_old: 26
  name: hpoa_disease_mode_of_inheritance_edges
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  - MONDO
  - OMIM
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    name: phenio_nodes
    namespaces:
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    taxon:
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    missing_subject_namespaces:
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    total_number: 28
    uri: biolink:has_mode_of_inheritance
  total_number: 28
- categories:
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  missing_old: 81
  name: hpoa_disease_to_phenotype_edges
  namespaces:
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  - HP
  - MONDO
  - OMIM
  - Orphanet
  node_types:
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    name: phenio_nodes
    namespaces:
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    taxon:
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    total_number: 433
  predicates:
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    missing_objects: 0
    missing_subject_namespaces:
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    - OMIM
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    missing_subjects: 81
    total_number: 633
    uri: biolink:has_phenotype
  total_number: 633
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  missing_old: 85
  name: hpoa_gene_to_disease_edges
  namespaces:
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  - OMIM
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  node_types:
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    name: hgnc_gene_nodes
    namespaces:
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    taxon:
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    total_number: 87
  - categories:
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    name: phenio_nodes
    namespaces:
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    taxon:
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    total_number: 11
  predicates:
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    missing_subject_namespaces:
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    total_number: 66
    uri: biolink:causes
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    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 14
    uri: biolink:contributes_to
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    - Orphanet
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    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 21
    uri: biolink:gene_associated_with_condition
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- categories:
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  name: hpoa_gene_to_phenotype_edges
  namespaces:
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  node_types:
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    name: phenio_nodes
    namespaces:
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    taxon:
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    total_number: 245
  predicates:
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    missing_objects: 0
    missing_subject_namespaces:
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    missing_subjects: 6
    total_number: 289
    uri: biolink:has_phenotype
  total_number: 289
- categories:
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  missing: 33542
  missing_old: 33542
  name: panther_genome_orthologs_edges
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  - FB
  - HGNC
  - MGI
  - NCBIGene
  - PomBase
  - RGD
  - SGD
  - UniProtKB
  - WB
  - Xenbase
  - ZFIN
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  node_types:
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    name: alliance_gene_nodes
    namespaces:
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    - MGI
    - RGD
    - SGD
    - WB
    - Xenbase
    - ZFIN
    taxon:
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    total_number: 68130
  - categories:
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    name: dictybase_gene_nodes
    namespaces:
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    taxon:
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    total_number: 4223
  - categories:
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    name: hgnc_gene_nodes
    namespaces:
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    taxon:
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    total_number: 13874
  - categories:
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    name: ncbi_gene_227321_nodes
    namespaces:
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    taxon:
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    total_number: 3242
  - categories:
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    name: ncbi_gene_9031_nodes
    namespaces:
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    taxon:
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    total_number: 6616
  - categories:
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    name: ncbi_gene_9615_nodes
    namespaces:
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    taxon:
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    total_number: 11192
  - categories:
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    name: ncbi_gene_9823_nodes
    namespaces:
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    taxon:
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    total_number: 11494
  - categories:
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    name: ncbi_gene_9913_nodes
    namespaces:
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    taxon:
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    total_number: 9109
  - categories:
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    name: pombase_gene_nodes
    namespaces:
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    taxon:
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    total_number: 2574
  predicates:
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    - WB
    - Xenbase
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    missing_objects: 31631
    missing_subject_namespaces:
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    - NCBIGene
    - RGD
    - UniProtKB
    - WB
    - Xenbase
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    missing_subjects: 31852
    total_number: 670650
    uri: biolink:orthologous_to
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- categories:
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  missing_old: 190
  name: pombase_gene_to_phenotype_edges
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    namespaces:
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    taxon:
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  - categories:
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    name: pombase_gene_nodes
    namespaces:
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    taxon:
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    missing_subject_namespaces:
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    total_number: 1823
    uri: biolink:has_phenotype
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  missing_old: 189
  name: reactome_chemical_to_pathway_edges
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    name: phenio_nodes
    namespaces:
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    taxon:
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  - categories:
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    name: reactome_pathway_nodes
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    taxon:
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    - NCBITaxon:44689
    - NCBITaxon:4896
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    - NCBITaxon:9615
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    total_number: 751
  predicates:
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    missing_subject_namespaces:
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    total_number: 1916
    uri: biolink:participates_in
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  missing_old: 5767
  name: reactome_gene_to_pathway_edges
  namespaces:
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    missing: 2343
    name: reactome_pathway_nodes
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    - Reactome
    taxon:
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    - NCBITaxon:44689
    - NCBITaxon:4896
    - NCBITaxon:4932
    - NCBITaxon:6239
    - NCBITaxon:7227
    - NCBITaxon:7955
    - NCBITaxon:8364
    - NCBITaxon:9031
    - NCBITaxon:9606
    total_number: 2343
  predicates:
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    missing_subject_namespaces:
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    - NCBIGene
    - Xenbase
    missing_subjects: 5766
    total_number: 19645
    uri: biolink:participates_in
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  missing: 14254
  missing_old: 14254
  name: string_protein_links_edges
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  - HGNC
  - MGI
  - NCBIGene
  - PomBase
  - RGD
  - WB
  - Xenbase
  - ZFIN
  node_types:
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    missing: 4003
    name: alliance_gene_nodes
    namespaces:
    - FB
    - MGI
    - RGD
    - WB
    - Xenbase
    - ZFIN
    taxon:
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    - NCBITaxon:10116
    - NCBITaxon:6239
    - NCBITaxon:7227
    - NCBITaxon:7955
    - NCBITaxon:8364
    total_number: 8631
  - categories:
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    missing: 234
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
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    total_number: 370
  - categories:
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    missing: 363
    name: ncbi_gene_227321_nodes
    namespaces:
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    taxon:
    - NCBITaxon:227321
    total_number: 609
  - categories:
    - biolink:Gene
    missing: 642
    name: ncbi_gene_9031_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9031
    total_number: 1373
  - categories:
    - biolink:Gene
    missing: 903
    name: ncbi_gene_9615_nodes
    namespaces:
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    taxon:
    - NCBITaxon:9615
    total_number: 1822
  - categories:
    - biolink:Gene
    missing: 269
    name: ncbi_gene_9913_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9913
    total_number: 493
  - categories:
    - biolink:Gene
    missing: 214
    name: pombase_gene_nodes
    namespaces:
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    taxon:
    - NCBITaxon:4896
    total_number: 2042
  predicates:
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    - NCBIGene
    - PomBase
    - Xenbase
    - ZFIN
    missing_objects: 13379
    missing_subject_namespaces:
    - FB
    - NCBIGene
    - PomBase
    - Xenbase
    - ZFIN
    missing_subjects: 13830
    total_number: 240623
    uri: biolink:interacts_with
  total_number: 240623
- categories:
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  missing: 36
  missing_old: 36
  name: xenbase_gene_to_phenotype_edges
  namespaces:
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  - Xenbase
  node_types:
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    missing: 92
    name: phenio_nodes
    namespaces:
    - XPO
    taxon:
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    total_number: 92
  predicates:
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    missing_objects: 0
    missing_subject_namespaces:
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    missing_subjects: 36
    total_number: 156
    uri: biolink:has_phenotype
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- categories:
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  missing: 15963
  missing_old: 15963
  name: xenbase_non_entrez_orthologs_edges
  namespaces:
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  - MGI
  - OMIM
  - Xenbase
  - ZFIN
  node_types:
  - categories:
    - biolink:Gene
    missing: 26678
    name: alliance_gene_nodes
    namespaces:
    - MGI
    - ZFIN
    taxon:
    - NCBITaxon:10090
    - NCBITaxon:7955
    total_number: 26678
  - categories:
    - biolink:Gene
    missing: 12569
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 12569
  predicates:
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    - OMIM
    - ZFIN
    missing_objects: 670
    missing_subject_namespaces:
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    total_number: 45045
    uri: biolink:orthologous_to
  total_number: 45045
- categories:
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  missing: 7946
  missing_old: 7946
  name: xenbase_orthologs_edges
  namespaces:
  - HGNC
  - MGI
  - NCBIGene
  - RGD
  - Xenbase
  - ZFIN
  node_types:
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    - biolink:Gene
    missing: 11138
    name: alliance_gene_nodes
    namespaces:
    - MGI
    - RGD
    - Xenbase
    - ZFIN
    taxon:
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    - NCBITaxon:10116
    - NCBITaxon:7955
    - NCBITaxon:8355
    - NCBITaxon:8364
    total_number: 11138
  - categories:
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    missing: 5761
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 5761
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    - ZFIN
    missing_objects: 572
    missing_subject_namespaces:
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    missing_subjects: 7374
    total_number: 20318
    uri: biolink:orthologous_to
  total_number: 20318
- categories:
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  missing: 231
  missing_old: 231
  name: zfin_genotype_to_phenotype_edges
  namespaces:
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  - ZP
  node_types:
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    name: phenio_nodes
    namespaces:
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    taxon:
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    total_number: 398
  predicates:
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    missing_objects: 0
    missing_subject_namespaces:
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    missing_subjects: 231
    total_number: 863
    uri: biolink:has_phenotype
  total_number: 863
- categories:
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  missing: 4
  missing_old: 4
  name: zfin_orthology_edges
  namespaces:
  - FB
  - MGI
  - ZFIN
  node_types:
  - categories:
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    missing: 4
    name: alliance_gene_nodes
    namespaces:
    - ZFIN
    taxon:
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    total_number: 4
  predicates:
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    - MGI
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    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 6
    uri: biolink:orthologous_to
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duplicate_edges:
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  missing: 10254
  missing_old: 10254
  name: bgee_gene_to_expression_edges
  namespaces:
  - CL
  - HGNC
  - NCBIGene
  - UBERON
  node_types:
  - categories:
    - biolink:Gene
    missing: 2
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
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    total_number: 2
  - categories:
    - biolink:Gene
    missing: 4881
    name: ncbi_gene_9031_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9031
    total_number: 4881
  - categories:
    - biolink:Gene
    missing: 48
    name: ncbi_gene_9823_nodes
    namespaces:
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    taxon:
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    total_number: 48
  - categories:
    - biolink:Gene
    missing: 929
    name: ncbi_gene_9913_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9913
    total_number: 929
  - categories:
    - biolink:AnatomicalEntity
    - biolink:Cell
    missing: 150
    name: phenio_nodes
    namespaces:
    - CL
    - UBERON
    taxon:
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    total_number: 150
  predicates:
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    missing_objects: 0
    missing_subject_namespaces:
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    missing_subjects: 10254
    total_number: 113050
    uri: biolink:expressed_in
  total_number: 113050
- categories:
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  missing: 0
  missing_old: 0
  name: biogrid_gene_to_gene_edges
  namespaces:
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  node_types:
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    missing: 8
    name: alliance_gene_nodes
    namespaces:
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    taxon:
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    total_number: 11
  predicates:
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    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 14
    uri: biolink:interacts_with
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- categories:
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  missing: 15
  missing_old: 15
  name: ctd_chemical_to_disease_edges
  namespaces:
  - CHEBI
  - MESH
  - MONDO
  node_types:
  - categories:
    - biolink:ChemicalEntity
    - biolink:Disease
    missing: 52
    name: phenio_nodes
    namespaces:
    - CHEBI
    - MONDO
    taxon:
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    total_number: 52
  predicates:
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    missing_objects: 15
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 100
    uri: biolink:treats_or_applied_or_studied_to_treat
  total_number: 100
- categories:
  - biolink:MacromolecularMachineToBiologicalProcessAssociation
  - biolink:MacromolecularMachineToCellularComponentAssociation
  - biolink:MacromolecularMachineToMolecularActivityAssociation
  missing: 1
  missing_old: 1
  name: go_annotation_edges
  namespaces:
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  - HGNC
  - NCBIGene
  - RGD
  node_types:
  - categories:
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    missing: 20
    name: alliance_gene_nodes
    namespaces:
    - RGD
    taxon:
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    total_number: 20
  - categories:
    - biolink:Gene
    missing: 180
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 180
  - categories:
    - biolink:Gene
    missing: 15
    name: ncbi_gene_9031_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9031
    total_number: 15
  - categories:
    - biolink:Gene
    missing: 45
    name: ncbi_gene_9615_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9615
    total_number: 45
  - categories:
    - biolink:Gene
    missing: 42
    name: ncbi_gene_9823_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9823
    total_number: 42
  - categories:
    - biolink:Gene
    missing: 58
    name: ncbi_gene_9913_nodes
    namespaces:
    - NCBIGene
    taxon:
    - NCBITaxon:9913
    total_number: 58
  - categories:
    - biolink:BiologicalProcess
    - biolink:CellularComponent
    - biolink:MolecularActivity
    missing: 415
    name: phenio_nodes
    namespaces:
    - GO
    taxon:
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    total_number: 415
  predicates:
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    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 1412
    uri: biolink:actively_involved_in
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 51
    uri: biolink:acts_upstream_of_or_within
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 12
    uri: biolink:acts_upstream_of_positive_effect
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 2
    uri: biolink:colocalizes_with
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 6
    uri: biolink:contributes_to
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 5447
    uri: biolink:enables
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 160
    uri: biolink:is_active_in
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 5018
    uri: biolink:located_in
  - missing_object_namespaces: []
    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 732
    uri: biolink:part_of
  total_number: 12840
- categories:
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  missing: 0
  missing_old: 0
  name: hpoa_disease_mode_of_inheritance_edges
  namespaces:
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  - MONDO
  node_types:
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    missing: 1
    name: hgnc_gene_nodes
    namespaces:
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    taxon:
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    total_number: 1
  - categories:
    - biolink:Disease
    - biolink:PhenotypicFeature
    missing: 2
    name: phenio_nodes
    namespaces:
    - HP
    - MONDO
    taxon:
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    total_number: 2
  predicates:
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    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 2
    uri: biolink:has_mode_of_inheritance
  total_number: 2
- categories:
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  missing: 0
  missing_old: 0
  name: hpoa_disease_to_phenotype_edges
  namespaces:
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  - HP
  - MONDO
  node_types:
  - categories:
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    missing: 1
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
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    total_number: 1
  - categories:
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    - biolink:PhenotypicFeature
    missing: 2
    name: phenio_nodes
    namespaces:
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    - MONDO
    taxon:
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    total_number: 2
  predicates:
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    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 2
    uri: biolink:has_phenotype
  total_number: 2
- categories:
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  missing: 19329
  missing_old: 19329
  name: panther_genome_orthologs_edges
  namespaces:
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  - FB
  - HGNC
  - MGI
  - NCBIGene
  - PomBase
  - RGD
  - SGD
  - UniProtKB
  - WB
  - Xenbase
  - ZFIN
  - dictyBase
  node_types:
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    missing: 39389
    name: alliance_gene_nodes
    namespaces:
    - FB
    - MGI
    - RGD
    - SGD
    - WB
    - Xenbase
    - ZFIN
    taxon:
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    - NCBITaxon:559292
    - NCBITaxon:6239
    - NCBITaxon:7227
    - NCBITaxon:7955
    - NCBITaxon:8364
    total_number: 39882
  - categories:
    - biolink:Gene
    missing: 3039
    name: dictybase_gene_nodes
    namespaces:
    - dictyBase
    taxon:
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    total_number: 3039
  - categories:
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    missing: 7193
    name: hgnc_gene_nodes
    namespaces:
    - HGNC
    taxon:
    - NCBITaxon:9606
    total_number: 7193
  - categories:
    - biolink:Gene
    missing: 2283
    name: ncbi_gene_227321_nodes
    namespaces:
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    taxon:
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    total_number: 2283
  - categories:
    - biolink:Gene
    missing: 576
    name: ncbi_gene_9031_nodes
    namespaces:
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    taxon:
    - NCBITaxon:9031
    total_number: 6084
  - categories:
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    missing: 5515
    name: ncbi_gene_9615_nodes
    namespaces:
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    taxon:
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    total_number: 6277
  - categories:
    - biolink:Gene
    missing: 5857
    name: ncbi_gene_9823_nodes
    namespaces:
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    taxon:
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    total_number: 6299
  - categories:
    - biolink:Gene
    missing: 4875
    name: ncbi_gene_9913_nodes
    namespaces:
    - NCBIGene
    taxon:
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    total_number: 5772
  - categories:
    - biolink:Gene
    missing: 1849
    name: pombase_gene_nodes
    namespaces:
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    taxon:
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    total_number: 1849
  predicates:
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    - FB
    - NCBIGene
    - UniProtKB
    - Xenbase
    - ZFIN
    missing_objects: 14935
    missing_subject_namespaces:
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    - HGNC
    - MGI
    - NCBIGene
    - RGD
    - UniProtKB
    missing_subjects: 15809
    total_number: 316184
    uri: biolink:orthologous_to
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- categories:
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  missing: 0
  missing_old: 0
  name: reactome_gene_to_pathway_edges
  namespaces:
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  - Reactome
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  node_types:
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    missing: 10
    name: alliance_gene_nodes
    namespaces:
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    - ZFIN
    taxon:
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    - NCBITaxon:7955
    total_number: 10
  - categories:
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    name: reactome_pathway_nodes
    namespaces:
    - Reactome
    taxon:
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    - NCBITaxon:7955
    total_number: 11
  predicates:
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    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 22
    uri: biolink:participates_in
  total_number: 22
- categories:
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  missing: 1
  missing_old: 1
  name: string_protein_links_edges
  namespaces:
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  - ZFIN
  node_types:
  - categories:
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    missing: 65
    name: alliance_gene_nodes
    namespaces:
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    - ZFIN
    taxon:
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    total_number: 109
  predicates:
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    missing_objects: 1
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 260
    uri: biolink:interacts_with
  total_number: 260
duplicate_nodes:
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  namespaces:
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  taxon:
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- categories:
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  name: clingen_variant_nodes
  namespaces:
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  taxon:
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  total_number: 3690
- categories:
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  name: clinvar_variant_nodes
  namespaces:
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  taxon:
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  total_number: 3690
edges:
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  missing_old: 0
  name: alliance_allele_edges
  namespaces:
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  - ZFIN
  node_types:
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    missing: 161325
    name: alliance_allele_nodes
    namespaces:
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    - RGD
    - ZFIN
    taxon:
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    - NCBITaxon:10116
    - NCBITaxon:7955
    total_number: 161325
  - categories:
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    missing: 41303
    name: alliance_gene_nodes
    namespaces:
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    - RGD
    - ZFIN
    taxon:
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    total_number: 41303
  predicates:
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    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 161650
    uri: biolink:is_sequence_variant_of
  total_number: 161650
- categories:
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  missing: 0
  missing_old: 0
  name: alliance_disease_edges
  namespaces:
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  node_types:
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    missing: 8546
    name: alliance_genotype_nodes
    namespaces:
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    - RGD
    - ZFIN
    taxon:
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    - NCBITaxon:10116
    - NCBITaxon:7955
    total_number: 8546
  - categories:
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    missing: 2078
    name: phenio_nodes
    namespaces:
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    taxon:
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    total_number: 2078
  predicates:
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    missing_objects: 0
    missing_subject_namespaces: []
    missing_subjects: 0
    total_number: 10069
    uri: biolink:model_of
  total_number: 10069
- categories:
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  missing_old: 0
  name: alliance_gene_to_expression_edges
  namespaces:
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  - FB
  - FBbt
  - GO
  - MGI
  - RGD
  - SGD
  - WB
  - WBbt
  - ZFA
  - ZFIN
  node_types:
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    missing: 54533
    name: alliance_gene_nodes
    namespaces:
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    - MGI
    - RGD
    - SGD
    - WB
    - ZFIN
    taxon:
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    - NCBITaxon:7227
    - NCBITaxon:7955
    total_number: 54533
  - categories:
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    uri: biolink:is_sequence_variant_of
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    uri: biolink:acts_upstream_of
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    total_number: 826
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    total_number: 992
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    uri: biolink:contributes_to
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    total_number: 17
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    uri: biolink:causes
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    total_number: 1020
    uri: biolink:disease_has_location
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    total_number: 269
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    total_number: 1109
    uri: biolink:has_phenotype
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    uri: biolink:related_to
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    total_number: 612920
    uri: biolink:subclass_of
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    total_number: 176720
    uri: biolink:has_phenotype
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    name: reactome_pathway_nodes
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    total_number: 33186
  - categories:
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    name: ncbi_gene_9031_nodes
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    total_number: 15045
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    uri: biolink:participates_in
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    total_number: 71336
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    name: hgnc_gene_nodes
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    taxon:
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    name: ncbi_gene_9615_nodes
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    total_number: 11935
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    name: ncbi_gene_9913_nodes
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    name: pombase_gene_nodes
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    taxon:
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    name: alliance_gene_nodes
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    taxon:
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    total_number: 542
  - categories:
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    total_number: 2436
    uri: biolink:has_phenotype
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    name: alliance_gene_nodes
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    total_number: 68724
  - categories:
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    name: hgnc_gene_nodes
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    taxon:
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    uri: biolink:orthologous_to
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    name: alliance_gene_nodes
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    taxon:
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  - categories:
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    name: phenio_nodes
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    uri: biolink:has_phenotype
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    name: alliance_genotype_nodes
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    taxon:
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  - categories:
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    uri: biolink:has_phenotype
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  node_types:
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    name: alliance_gene_nodes
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  - categories:
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    name: hgnc_gene_nodes
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    taxon:
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    total_number: 62194
    uri: biolink:orthologous_to
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nodes:
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  total_number: 194293
- categories:
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  total_number: 331334
- categories:
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  taxon:
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  total_number: 137639
- categories:
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- categories:
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- categories:
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  taxon:
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- categories:
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  taxon:
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- categories:
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  taxon:
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- categories:
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  taxon:
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  total_number: 32180
- categories:
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  namespaces:
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  taxon:
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- categories:
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  namespaces:
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  taxon:
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- categories:
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  namespaces:
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  taxon:
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- categories:
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  - GO
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  - MP
  - MPATH
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  - owl
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- categories:
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  namespaces:
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  taxon:
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- categories:
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  total_number: 22254
