# curie_map: # semapv: https://w3id.org/semapv/vocab/ # LOINC: http://loinc.org/rdf/ # UBERON: http://purl.obolibrary.org/obo/UBERON_ # skos: http://www.w3.org/2004/02/skos/core# # wikidata: https://www.wikidata.org/entity/ # orcid: https://orcid.org/ # license: http://creativecommons.org/publicdomain/zero/1.0/ # mapping_date: '2023-05-01' # mapping_set_description: "This mapping set contains mappings between LOINC parts and Uberon anatomical entities. The predicate revision on qualified parts was applied programmatically; the underlying subject-object mappings are the original manual curation." # mapping_set_id: http://w3id.org/sssom/commons/monarch/mappings/loincpart2uberon.sssom.tsv # issue_tracker: https://github.com/monarch-initiative/monarch-mapping-commons/issues # creator_label: "Monarch Initiative" # creator_id: # - wikidata:Q34645736 # - orcid:0000-0002-5316-1399 subject_id subject_label predicate_id object_id object_label mapping_justification comment LOINC:LP7567-3 Serum skos:broadMatch UBERON:0001977 blood serum semapv:ManualMappingCuration LOINC:LP30270-0 Ser^Donor skos:exactMatch UBERON:0001977 blood serum semapv:ManualMappingCuration LOINC:LP7576-4 Ser/Plas skos:broadMatch UBERON:0001969 blood plasma semapv:ManualMappingCuration LOINC:LP35604-5 serum^control skos:exactMatch UBERON:0001977 serum semapv:ManualMappingCuration LOINC:LP262388-4 serum^fetus skos:broadMatch UBERON:0001977 serum semapv:ManualMappingCuration LOINC:LP30268-4 Serum or Plasma^BPU skos:broadMatch UBERON:0001969 blood plasma semapv:ManualMappingCuration LOINC:LP187191-4 Blood or Tissue^Donor skos:broadMatch UBERON:0001969 blood plasma semapv:ManualMappingCuration LOINC:LP7494-0 Platelet poor plasma skos:broadMatch UBERON:0001969 blood plasma semapv:ManualMappingCuration LOINC:LP30269-2 Serum or Plasma^Donor skos:relatedMatch UBERON:0001969 blood plasma semapv:ManualMappingCuration LOINC:LP7681-2 Urine skos:exactMatch UBERON:0001088 urine semapv:ManualMappingCuration LOINC:LP7690-3 Urine sediment skos:relatedMatch UBERON:0001088 urine semapv:ManualMappingCuration LOINC:LP281836-9 Urine^Fetus skos:exactMatch UBERON:0001088 urine semapv:ManualMappingCuration LOINC:LP7057-5 Bld skos:exactMatch UBERON:0000178 blood semapv:ManualMappingCuration LOINC:LP21304-8 Bld.dot skos:exactMatch UBERON:0000178 blood semapv:ManualMappingCuration LOINC:LP183539-8 Positive blood culture skos:relatedMatch UBERON:0000178 blood semapv:ManualMappingCuration LOINC:LP31684-1 blood capillary^fetus skos:broadMatch UBERON:0000178 blood semapv:ManualMappingCuration LOINC:LP29829-6 blood^bpu skos:broadMatch UBERON:0000178 blood semapv:ManualMappingCuration LOINC:LP29294-3 blood^control skos:broadMatch UBERON:0000178 blood semapv:ManualMappingCuration LOINC:LP29830-4 blood^donor skos:broadMatch UBERON:0000178 blood semapv:ManualMappingCuration LOINC:LP281790-8 blood^patient skos:broadMatch UBERON:0000178 blood semapv:ManualMappingCuration LOINC:LP7156-5 CSF skos:exactMatch UBERON:0001359 cerebrospinal fluid semapv:ManualMappingCuration LOINC:LP7238-1 Body fld skos:exactMatch UBERON:0006314 bodily fluid semapv:ManualMappingCuration LOINC:LP7641-6 Tiss skos:exactMatch UBERON:0000479 tissue semapv:ManualMappingCuration LOINC:LP7479-1 Plas skos:exactMatch UBERON:0001969 blood plasma semapv:ManualMappingCuration LOINC:LP7604-4 Stool skos:exactMatch UBERON:0001988 feces semapv:ManualMappingCuration LOINC:LP7565-7 Saliva skos:exactMatch UBERON:0001836 saliva semapv:ManualMappingCuration LOINC:LP7600-2 Sputum skos:exactMatch UBERON:0007311 sputum semapv:ManualMappingCuration LOINC:LP7000-5 Amniotic fluid skos:exactMatch UBERON:0000173 amniotic fluid semapv:ManualMappingCuration LOINC:LP7255-5 Gastric fluid skos:relatedMatch UBERON:0000174 excreta semapv:ManualMappingCuration LOINC:LP7280-3 Hair skos:exactMatch UBERON:0001037 strand of hair semapv:ManualMappingCuration LOINC:LP7592-1 Synovial fluid skos:exactMatch UBERON:0001090 synovial fluid semapv:ManualMappingCuration LOINC:LP7413-0 Meconium skos:exactMatch UBERON:0007109 meconium semapv:ManualMappingCuration LOINC:LP7486-6 Pleural fluid skos:exactMatch UBERON:0001087 pleural fluid semapv:ManualMappingCuration LOINC:LP201886-1 Lower respiratory specimen skos:exactMatch UBERON:0001558 lower respiratory tract semapv:ManualMappingCuration LOINC:LP208441-8 Upper respiratory specimen skos:exactMatch UBERON:0001557 upper respiratory tract semapv:ManualMappingCuration LOINC:LP208442-6 Respiratory specimen skos:exactMatch UBERON:0000065 respiratory tract semapv:ManualMappingCuration LOINC:LP7507-9 Peritoneal fluid skos:exactMatch UBERON:0001268 peritoneal fluid semapv:ManualMappingCuration LOINC:LP7589-7 Semen skos:exactMatch UBERON:0001968 semen semapv:ManualMappingCuration LOINC:LP7410-6 Bone marrow skos:exactMatch UBERON:0002371 bone marrow semapv:ManualMappingCuration LOINC:LP426511-4 Umbilical cord skos:exactMatch UBERON:0002331 umbilical cord semapv:ManualMappingCuration LOINC:LP30875-6 Nasopharynx skos:exactMatch UBERON:0001728 nasopharynx semapv:ManualMappingCuration LOINC:LP7579-8 Serum, Plasma or Blood skos:exactMatch UBERON:0000178 blood semapv:ManualMappingCuration LOINC:LP7271-2 Vaginal skos:exactMatch UBERON:0000996 vagina semapv:ManualMappingCuration LOINC:LP7633-3 Throat skos:exactMatch UBERON:0000341 throat semapv:ManualMappingCuration LOINC:LP7715-8 Vitreous fluid skos:exactMatch UBERON:0001797 vitreous humor semapv:ManualMappingCuration LOINC:LP7261-3 Genital skos:exactMatch UBERON:0000990 genitalia semapv:ManualMappingCuration LOINC:LP7162-3 Cervix skos:exactMatch UBERON:0000002 uterine cervix semapv:ManualMappingCuration LOINC:LP7466-8 Pericardial fluid skos:exactMatch UBERON:0002409 pericardial fluid semapv:ManualMappingCuration LOINC:LP7443-7 Nose skos:exactMatch UBERON:0000004 nose semapv:ManualMappingCuration LOINC:LP7069-0 Blood cord skos:exactMatch UBERON:0012168 umbilical cord blood semapv:ManualMappingCuration LOINC:LP281788-2 Blood^Fetus skos:exactMatch UBERON:0012168 umbilical cord blood semapv:ManualMappingCuration LOINC:LP29830-4 blood^donor skos:broadMatch UBERON:0000178 blood semapv:ManualMappingCuration LOINC:LP7431-2 Milk skos:exactMatch UBERON:0001913 milk semapv:ManualMappingCuration LOINC:LP36760-4 Skin skos:exactMatch UBERON:0000014 zone of skin semapv:ManualMappingCuration LOINC:LP30364-1 Urethra skos:exactMatch UBERON:0000057 urethra semapv:ManualMappingCuration LOINC:LP7068-2 Blood capillary skos:exactMatch UBERON:0001982 blood capillary semapv:ManualMappingCuration LOINC:LP7067-4 Blood arterial skos:exactMatch UBERON:0013755 arterial blood semapv:ManualMappingCuration LOINC:LP7073-2 Blood venous skos:exactMatch UBERON:0013756 venous blood semapv:ManualMappingCuration LOINC:LP7006-2 Anal skos:exactMatch UBERON:0001353 anal region semapv:ManualMappingCuration LOINC:LP34092-4 Penis skos:exactMatch UBERON:0000989 penis semapv:ManualMappingCuration LOINC:LP7438-7 Nail skos:exactMatch UBERON:0001705 nail semapv:ManualMappingCuration LOINC:LP7091-4 Bronchial skos:exactMatch UBERON:0002185 bronchus semapv:ManualMappingCuration LOINC:LP36498-1 Bronchoalveolar lavage skos:exactMatch UBERON:0006524 alveolar system semapv:ManualMappingCuration LOINC:LP150065-3 Prostatic fluid skos:exactMatch UBERON:0004796 prostatic fluid semapv:ManualMappingCuration LOINC:LP7084-9 Brain skos:exactMatch UBERON:0000955 brain semapv:ManualMappingCuration LOINC:LP7218-3 Eye skos:exactMatch UBERON:0000970 eye semapv:ManualMappingCuration LOINC:LP7477-5 Placenta skos:exactMatch UBERON:0001987 placenta semapv:ManualMappingCuration LOINC:LP7217-5 Exudate skos:exactMatch UBERON:0007780 exudate semapv:ManualMappingCuration LOINC:LP7618-4 Sweat skos:exactMatch UBERON:0001089 sweat semapv:ManualMappingCuration LOINC:LP17770-6 Mucus skos:exactMatch UBERON:0000912 mucus semapv:ManualMappingCuration LOINC:LP7161-5 Cervical mucus skos:exactMatch UBERON:0000316 cervical mucus semapv:ManualMappingCuration LOINC:LP7407-2 Lung skos:exactMatch UBERON:0002048 lung semapv:ManualMappingCuration LOINC:LP7649-9 Trachea skos:exactMatch UBERON:0003126 trachea semapv:ManualMappingCuration LOINC:LP7717-4 Vomitus skos:exactMatch UBERON:0000172 vomitus semapv:ManualMappingCuration LOINC:LP7400-7 Liver skos:exactMatch UBERON:0002107 liver semapv:ManualMappingCuration LOINC:LP281813-8 liver^fetus skos:broadMatch UBERON:0002107 liver semapv:ManualMappingCuration LOINC:LP7188-8 Ear skos:exactMatch UBERON:0001690 ear semapv:ManualMappingCuration LOINC:LP7193-8 Egg yolk skos:exactMatch UBERON:0007378 egg yolk semapv:ManualMappingCuration